RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 COX16Q9P0S2 106 aa6.06□□□□□ -1.44
CPSF2-205ENST00000556622 SUN2Q9UH99 717 aa6.06□□□□□ -1.44
CPSF2-205ENST00000556622 CROTQ9UKG9 612 aa6.06□□□□□ -1.44
CPSF2-205ENST00000556622 SARDHQ9UL12 918 aa6.06□□□□□ -1.44
CPSF2-205ENST00000556622 SLC8A2Q9UPR5 921 aa6.06□□□□□ -1.44
CPSF2-205ENST00000556622 LZTS1Q9Y250 596 aa6.06□□□□□ -1.44
CPSF2-205ENST00000556622 NLRC5Q86WI3 1866 aa6.06□□□□□ -1.44
CPSF2-205ENST00000556622 A0A087WXM4 84 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 YJEFN3A6XGL0 299 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 NRP1O14786 923 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 IRAK2O43187 625 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 BUD23O43709 281 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 NRP2O60462 931 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SNAP91O60641 907 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 LYPLA1O75608 230 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TMCC1O94876 653 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 IGLV3-25P01717 112 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SLC35E2BP0CK96 405 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 ENO3P13929 434 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 KCNA5P22460 613 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PMLP29590 882 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 LTBRP36941 435 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MAGEA11P43364 429 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 NRIP1P48552 1158 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SLC11A1P49279 550 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MRPL19P49406 292 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CSRP3P50461 194 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TUBP50607 506 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 RPS6KA3P51812 740 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CCNHP51946 323 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PSME3P61289 254 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 HERVK_113P63132 956 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CRADDP78560 199 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MPP1Q00013 466 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PFKPQ01813 784 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CREB5Q02930 508 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 YWHAHQ04917 246 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 IL10RBQ08334 325 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 ELAVL2Q12926 359 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MAD2L1Q13257 205 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 ADAM15Q13444 863 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SLC9A5Q14940 896 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 UPP1Q16831 310 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 GEN1Q17RS7 908 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SLC9B1Q4ZJI4 515 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CERCAMQ5T4B2 595 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TSTD2Q5T7W7 516 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PLPP4Q5VZY2 271 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 BICRALQ6AI39 1079 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 ZNF470Q6ECI4 717 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 KIAA1841Q6NSI8 718 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TTC23LQ6PF05 361 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PAQR9Q6ZVX9 377 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CMC1Q7Z7K0 106 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 DDX53Q86TM3 631 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 HPS6Q86YV9 775 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SLC39A11Q8N1S5 342 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 STK40Q8N2I9 435 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MIER2Q8N344 545 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MINDY1Q8N5J2 469 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MRPL43Q8N983 215 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SYT8Q8NBV8 401 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 RCBTB1Q8NDN9 531 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 IPMKQ8NFU5 416 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 DQX1Q8TE96 717 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 USP33Q8TEY7 942 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CLEC4CQ8WTT0 213 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 CCDC124Q96CT7 223 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PABPC5Q96DU9 382 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 DCUN1D1Q96GG9 259 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 IGSF21Q96ID5 467 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SLC45A3Q96JT2 553 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 BTN2A3PQ96KV6 586 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 C8orf48Q96LL4 319 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MAGEB10Q96LZ2 347 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TCF25Q9BQ70 676 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TMEM175Q9BSA9 504 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 FICDQ9BVA6 458 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 OSBPL10Q9BXB5 764 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 ERVK-6Q9BXR3 956 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TRIM54Q9BYV2 358 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 C20orf27Q9GZN8 174 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 POLR1EQ9GZS1 481 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 NACA2Q9H009 215 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 POMKQ9H5K3 350 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 UBE2ZQ9H832 354 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MAGEE1Q9HCI5 957 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TLR8Q9NR97 1041 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PNPLA3Q9NST1 481 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TREX1Q9NSU2 369 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 XPR1Q9UBH6 696 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 GULP1Q9UBP9 304 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 SCML2Q9UQR0 700 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 MYRFQ9Y2G1 1151 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TRAF6Q9Y4K3 522 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TNPO3Q9Y5L0 923 aaKnown RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TIMM13Q9Y5L4 95 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-205ENST00000556622 PSAT1Q9Y617 370 aa6.05□□□□□ -1.44
CPSF2-205ENST00000556622 TCF20Q9UGU0 1960 aaKnown RBP6.04□□□□□ -1.44
CPSF2-205ENST00000556622 CCDC160A6NGH7 325 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms