RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 UBE2R2Q712K3 238 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ARMCX6Q7L4S7 300 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ISCA2Q86U28 154 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 GKN2Q86XP6 184 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 SYT12Q8IV01 421 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 SLC22A15Q8IZD6 547 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 CENPLQ8N0S6 344 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 PLD6Q8N2A8 252 aaKnown RBP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 RAB42Q8N4Z0 105 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 AVL9Q8NBF6 648 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ZBTB44Q8NCP5 570 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 LKAAEAR1Q8TD35 194 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 DENND1AQ8TEH3 1009 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ATL1Q8WXF7 558 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 OR1E3Q8WZA6 343 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 PIGKQ92643 395 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 TSACCQ96A04 125 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 CCDC97Q96F63 343 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 LOXL4Q96JB6 756 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 SLC30A3Q99726 388 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ORAI3Q9BRQ5 295 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 OSGEPL1Q9H4B0 414 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ALG9Q9H6U8 611 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ERVMER34-1Q9H9K5 563 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 FGF22Q9HCT0 170 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 TMEM216Q9P0N5 145 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 FAM8A1Q9UBU6 413 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 DOLKQ9UPQ8 538 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 DNAJC16Q9Y2G8 782 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 COLEC10Q9Y6Z7 277 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 MYLKQ15746 1914 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 TTC28Q96AY4 2481 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 NUMA1Q14980 2115 aa9.02□□□□□ -0.96
ACTN1-218ENST00000556343 OR5K4A6NMS3 321 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PDZK1P1A8MUH7 402 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SUPT3HB4E1H0 165 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 YKT6O15498 198 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SUPT3HO75486 399 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SNUPNO95149 360 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PROCP04070 461 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CSF2P04141 144 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 BPGMP07738 259 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SYPP08247 313 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ANXA5P08758 320 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 GFAPP14136 432 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 JUNDP17535 347 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ITPKAP23677 461 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 NDUFS1P28331 727 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 MDH1P40925 334 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SERPINB4P48594 390 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 RPIAP49247 311 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ARRB1P49407 418 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CSNK1EP49674 416 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 NXPH1P58417 271 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 IRX4P78413 519 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 DLG1Q12959 904 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 FZD2Q14332 565 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 NFE2L1Q14494 772 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ALG11Q2TAA5 492 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 TECRLQ5HYJ1 363 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CFAP157Q5JU67 520 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SULT1C3Q6IMI6 304 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 WASH2PQ6VEQ5 465 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ZYG11AQ6WRX3 759 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 NAPRTQ6XQN6 538 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CDHR3Q6ZTQ4 885 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PIWIL4Q7Z3Z4 852 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 TAF8Q7Z7C8 310 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 C11orf96Q7Z7L8 435 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PHACTR4Q8IZ21 702 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 TCAIMQ8N3R3 496 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SPATA6LQ8N4H0 392 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CFAP61Q8NHU2 1237 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 GIMAP7Q8NHV1 300 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 RAB3IL1Q8TBN0 382 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 LRRC8CQ8TDW0 803 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 NAT14Q8WUY8 206 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ASB11Q8WXH4 323 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 RAD51AP1Q96B01 352 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CCDC138Q96M89 665 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 GPR78Q96P69 363 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SLC12A9Q9BXP2 914 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CAPS2Q9BXY5 557 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 ZDHHC5Q9C0B5 715 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 TRIT1Q9H3H1 467 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 MVB12BQ9H7P6 319 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 RDH14Q9HBH5 336 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PARVBQ9HBI1 364 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 MRPL40Q9NQ50 206 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 WASH6PQ9NQA3 447 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 GPR27Q9NS67 375 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 DNAJC28Q9NX36 388 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 NUDT4Q9NZJ9 180 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CD274Q9NZQ7 290 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CPSF2Q9P2I0 782 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 SLC17A7Q9P2U7 560 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 COPG2Q9UBF2 871 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 XPR1Q9UBH6 696 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms