RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CSPG5O95196 566 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 SLC25A14O95258 325 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 ESRRBO95718 433 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PRNPP04156 253 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 EEF1DP29692 281 aaKnown RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 CA5AP35218 305 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 GCKP35557 465 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 VIPR2P41587 438 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 MAGEA10P43363 369 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 CCNG1P51959 295 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 HK3P52790 923 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PKNOX1P55347 436 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 ST8SIA6P61647 398 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 FCHO2Q0JRZ9 810 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 CYLC2Q14093 348 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 ARHGEF7Q14155 803 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PTK2BQ14289 1009 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 SQLEQ14534 574 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 GBX1Q14549 363 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 TGFBIQ15582 683 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PDCD2Q16342 344 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PPP1R3AQ16821 1122 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 TRMT5Q32P41 509 aaKnown RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 ATP13A5Q4VNC0 1218 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 SBSNQ6UWP8 590 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 TECPR1Q7Z6L1 1165 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 SCUBE1Q8IWY4 988 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 NRSN1Q8IZ57 195 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 MYO1HQ8N1T3 1032 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 TRAM1L1Q8N609 369 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 C12orf76Q8N812 135 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PDPRQ8NCN5 879 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 OR56A4Q8NGH8 313 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 FBXO27Q8NI29 283 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 AGR3Q8TD06 166 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 AGAP11Q8TF27 550 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 CYB5D2Q8WUJ1 264 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PPP2R3CQ969Q6 453 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 C19orf60Q96EN9 201 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 ZNF382Q96SR6 550 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 BOCQ9BWV1 1114 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 SHCBP1LQ9BZQ2 653 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 FAM83DQ9H4H8 585 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 DCLRE1BQ9H816 532 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 RNPEPL1Q9HAU8 725 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 MID1IP1Q9NPA3 183 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PCDH12Q9NPG4 1184 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 UTP6Q9NYH9 597 aaKnown RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 DEC1Q9P2X7 70 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 MSRAQ9UJ68 235 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PTBP2Q9UKA9 531 aaKnown RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PCTPQ9UKL6 214 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PPM1HQ9ULR3 514 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 OARD1Q9Y530 152 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 DNAJC15Q9Y5T4 150 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 COPG1Q9Y678 874 aaKnown RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PRSS21Q9Y6M0 314 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 EDDM13A0A1B0GTR0 161 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 IQCF5A8MTL0 148 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 A8MUI8 341 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 HEPACAM2A8MVW5 462 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 F8W735 103 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 H0Y858 1186 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 QSOX1O00391 747 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 E2F3O00716 465 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 NEMP1O14524 444 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 TRIM24O15164 1050 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 UBDO15205 165 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 SLC16A5O15375 505 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 HYAL3O43820 417 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 NUAK1O60285 661 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 PEX11AO75192 247 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 GPC4O75487 556 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 CIB2O75838 187 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 SIX3O95343 332 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 TRIM16O95361 564 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 RPLP1P05386 114 aaKnown RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 CTSLP07711 333 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 ENO2P09104 434 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 OR56A5P0C7T3 313 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 UROSP10746 265 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 GM2AP17900 193 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 ITGAXP20702 1163 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 FCARP24071 287 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 AOAHP28039 575 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 EIF2DP41214 584 aaKnown RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 CPA2P48052 419 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 CDH13P55290 713 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 ACTR3P61158 418 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 CDKL1Q00532 357 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 B4GALNT1Q00973 533 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 CREB5Q02930 508 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 HYAL2Q12891 473 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 RALGDSQ12967 914 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 STX5Q13190 355 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 E2F5Q15329 346 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 MAPRE2Q15555 327 aa8.15□□□□□ -1.1
ATXN3-235ENST00000556082 HNRNPA1L2Q32P51 320 aaKnown RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 PREPLQ4J6C6 727 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-235ENST00000556082 PLEKHS1Q5SXH7 462 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms