RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OLFML3Q9NRN5 406 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 ERAP1Q9NZ08 941 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 SLC7A7Q9UM01 511 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 MYH15Q9Y2K3 1946 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 A0A1W2PPR1 153 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 ATP6V0E1O15342 81 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 DAB1O75553 588 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 SEC14L2O76054 403 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 ACADLP28330 430 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 CSTF3Q12996 717 aaKnown RBP2.46□□□□□ -2.02
SRP54-207ENST00000555535 ADIPOQQ15848 244 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 CCNG2Q16589 344 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 TAF1BQ53T94 588 aaPredicted RBP2.46□□□□□ -2.02
SRP54-207ENST00000555535 KLC3Q6P597 504 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 CORO6Q6QEF8 472 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 CYP20A1Q6UW02 462 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 Q6ZRP5 223 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 TPRG1Q6ZUI0 275 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 PIGZQ86VD9 579 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 RNF168Q8IYW5 571 aaPredicted RBP2.46□□□□□ -2.02
SRP54-207ENST00000555535 NGEFQ8N5V2 710 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 ANKRD42Q8N9B4 389 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 PRSS33Q8NF86 280 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 LRRC61Q9BV99 259 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 AGXT2Q9BYV1 514 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 PAIP1Q9H074 479 aaKnown RBP2.46□□□□□ -2.02
SRP54-207ENST00000555535 FLRT3Q9NZU0 649 aa2.46□□□□□ -2.02
SRP54-207ENST00000555535 TMEM8BA6NDV4 472 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 RRN3P2A6NIE6 340 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 HCRTR2O43614 444 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 IPO7O95373 1038 aaKnown RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 GPIP06744 558 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 H1F0P07305 194 aaKnown RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 UGT1A4P22310 534 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 MAGEA11P43364 429 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 ELAVL2Q12926 359 aaKnown RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 NAB2Q15742 525 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 MEP1AQ16819 746 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 TMEM198Q66K66 360 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 GALNT13Q8IUC8 556 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 HJURPQ8NCD3 748 aaPredicted RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 METTL6Q8TCB7 284 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 TRPC4APQ8TEL6 797 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 GTF3AQ92664 365 aaKnown RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 ZKSCAN4Q969J2 545 aaPredicted RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 ZNF582Q96NG8 517 aaPredicted RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 SLC22A12Q96S37 553 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 MYADMQ96S97 322 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 SOSTQ9BQB4 213 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 DENND2DQ9H6A0 471 aaPredicted RBP2.45□□□□□ -2.02
SRP54-207ENST00000555535 ATP13A3Q9H7F0 1226 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 ACKR4Q9NPB9 350 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 RRN3Q9NYV6 651 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 ZDHHC2Q9UIJ5 367 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 RIPK3Q9Y572 518 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 DGKBQ9Y6T7 804 aa2.45□□□□□ -2.02
SRP54-207ENST00000555535 CCDC196A0A1B0GTZ2 297 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 SOCS3O14543 225 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 ITIH1P19827 911 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 RGS2P41220 211 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 MSH2P43246 934 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 PSMC4P43686 418 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 B3GALT5-AS1P59052 145 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 RPS18P62269 152 aaKnown RBP2.44□□□□□ -2.02
SRP54-207ENST00000555535 RPL7AP62424 266 aaKnown RBP2.44□□□□□ -2.02
SRP54-207ENST00000555535 NFATC2Q13469 925 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 SGSM1Q2NKQ1 1148 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 FAM109BQ6ICB4 259 aaPredicted RBP2.44□□□□□ -2.02
SRP54-207ENST00000555535 ZNF554Q86TJ5 538 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 ARMC8Q8IUR7 673 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 HACE1Q8IYU2 909 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 OR1J1Q8NGS3 322 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 SGCDQ92629 289 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 DAZLQ92904 295 aaKnown RBP2.44□□□□□ -2.02
SRP54-207ENST00000555535 SMARCE1Q969G3 411 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 FAM149B1Q96BN6 582 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 CENPTQ96BT3 561 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 UPF3AQ9H1J1 476 aaKnown RBP2.44□□□□□ -2.02
SRP54-207ENST00000555535 PANK3Q9H999 370 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 TAS2R10Q9NYW0 307 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 DBNLQ9UJU6 430 aaKnown RBP2.44□□□□□ -2.02
SRP54-207ENST00000555535 ARHGAP26Q9UNA1 814 aa2.44□□□□□ -2.02
SRP54-207ENST00000555535 IGHV3OR16-10A0A075B7F0 116 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 KPNA7A9QM74 516 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 KRTAP4-16G5E9R7 235 aaPredicted RBP2.43□□□□□ -2.02
SRP54-207ENST00000555535 PIGNO95427 931 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 PYGLP06737 847 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 EFNA1P20827 205 aaPredicted RBP2.43□□□□□ -2.02
SRP54-207ENST00000555535 RBMS1P29558 406 aaKnown RBP2.43□□□□□ -2.02
SRP54-207ENST00000555535 GPR143P51810 404 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 GAGE2BQ13066 116 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 RNF212Q495C1 297 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 GAGE2EQ4V326 116 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 KLHL26Q53HC5 615 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 GAGE2AQ6NT46 116 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 PTAR1Q7Z6K3 402 aaPredicted RBP2.43□□□□□ -2.02
SRP54-207ENST00000555535 HEATR4Q86WZ0 1026 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 MARCH9Q86YJ5 346 aa2.43□□□□□ -2.02
SRP54-207ENST00000555535 HPS6Q86YV9 775 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms