RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ZDHHC12Q96GR4 267 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 RMDN2Q96LZ7 410 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 C12orf66Q96MD2 445 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 CCNL2Q96S94 520 aaPredicted RBP7.35□□□□□ -1.23
LINC00640-201ENST00000554409 NAP1L3Q99457 506 aaPredicted RBP7.35□□□□□ -1.23
LINC00640-201ENST00000554409 ZPBPQ9BS86 351 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 SPRY4Q9C004 299 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 IL22Q9GZX6 179 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 OR52A5Q9H2C5 316 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 ZNF768Q9H5H4 540 aaKnown RBP7.35□□□□□ -1.23
LINC00640-201ENST00000554409 COG4Q9H9E3 785 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 CPNE5Q9HCH3 593 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 FBXO8Q9NRD0 319 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 IMP3Q9NV31 184 aaKnown RBP7.35□□□□□ -1.23
LINC00640-201ENST00000554409 SIDT1Q9NXL6 827 aaKnown RBP7.35□□□□□ -1.23
LINC00640-201ENST00000554409 SLC39A1Q9NY26 324 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 SLC2A6Q9UGQ3 507 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 RALYQ9UKM9 306 aaKnown RBP7.35□□□□□ -1.23
LINC00640-201ENST00000554409 HEBP2Q9Y5Z4 205 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 B3GALT1Q9Y5Z6 326 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 PTPRQQ9UMZ3 2332 aa7.35□□□□□ -1.23
LINC00640-201ENST00000554409 CCDC78A2IDD5 438 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 OR5K3A6NET4 321 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 F8W8V4 182 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 AGRPO00253 132 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 PGRMC1O00264 195 aaKnown RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 LIN7AO14910 233 aaPredicted RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 ATXN7O15265 892 aaPredicted RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 GOT2P00505 430 aaKnown RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 FTH1P02794 183 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 POLBP06746 335 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 PPARGP37231 505 aaPredicted RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 LEPRP48357 1165 aaKnown RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 PRAMEP78395 509 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 RHDQ02161 417 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 KCNJ11Q14654 390 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 AARS2Q5JTZ9 985 aaKnown RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 SNAP47Q5SQN1 464 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 ANKS6Q68DC2 871 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 TTC27Q6P3X3 843 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 LRRC8BQ6P9F7 803 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 CCDC81Q6ZN84 652 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 MICALCLQ6ZW33 695 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 ZFAND4Q86XD8 727 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 FAM129CQ86XR2 697 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 KMT5CQ86Y97 462 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 CFAP206Q8IYR0 622 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 CARFQ8N187 725 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 SLC35F6Q8N357 371 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 CLDN19Q8N6F1 224 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 OR4L1Q8NH43 312 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 ACTRT1Q8TDG2 376 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 UBXN4Q92575 508 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 ANP32BQ92688 251 aaKnown RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 HDAC10Q969S8 669 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 MS4A14Q96JA4 679 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 ZNF778Q96MU6 729 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 TGM7Q96PF1 710 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 OSBPL9Q96SU4 736 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 CD180Q99467 661 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 TTC1Q99614 292 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 KIFC1Q9BW19 673 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 MRM3Q9HC36 420 aaKnown RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 CHRAC1Q9NRG0 131 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 TREX1Q9NSU2 369 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 SMARCAL1Q9NZC9 954 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 BFARQ9NZS9 450 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 KLHL3Q9UH77 587 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 SLC24A2Q9UI40 661 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 SNX12Q9UMY4 172 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 NEU2Q9Y3R4 380 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 TMEM184BQ9Y519 407 aaPredicted RBP7.34□□□□□ -1.23
LINC00640-201ENST00000554409 PCDHB11Q9Y5F2 797 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 PRSS21Q9Y6M0 314 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 COLEC10Q9Y6Z7 277 aa7.34□□□□□ -1.23
LINC00640-201ENST00000554409 DSPP15924 2871 aaKnown RBP7.34□□□□□ -1.24
LINC00640-201ENST00000554409 CELSR3Q9NYQ7 3312 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 TLCD2A6NGC4 264 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 ERVH48-1M5A8F1 160 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 MATN2O00339 956 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 IFRD1O00458 451 aaPredicted RBP7.33□□□□□ -1.24
LINC00640-201ENST00000554409 POLR1CO15160 346 aaPredicted RBP7.33□□□□□ -1.24
LINC00640-201ENST00000554409 EFSO43281 561 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 KIF5CO60282 957 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 PHF2O75151 1096 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 RASSF9O75901 435 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 DLGAP3O95886 979 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 KRT14P02533 472 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 OR56A5P0C7T3 313 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 CCNYL3P0C7X3 344 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 MLNP12872 115 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 NELFEP18615 380 aaKnown RBP7.33□□□□□ -1.24
LINC00640-201ENST00000554409 PDHA2P29803 388 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 COILP38432 576 aaPredicted RBP7.33□□□□□ -1.24
LINC00640-201ENST00000554409 FNTAP49354 379 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 ATP1A2P50993 1020 aa7.33□□□□□ -1.24
LINC00640-201ENST00000554409 SARNPP82979 210 aaKnown RBP7.33□□□□□ -1.24
LINC00640-201ENST00000554409 PLOD1Q02809 727 aaPredicted RBP7.33□□□□□ -1.24
LINC00640-201ENST00000554409 BOP1Q14137 746 aaKnown RBP7.33□□□□□ -1.24
LINC00640-201ENST00000554409 MAP7Q14244 749 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms