RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SP100P23497 879 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 CEACAM8P31997 349 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 PRAMEP78395 509 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 MRPS5P82675 430 aaKnown RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 PPARDQ03181 441 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 MED22Q15528 200 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 TCTE1Q5JU00 501 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 RARS2Q5T160 578 aaKnown RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 TMEM154Q6P9G4 183 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 ARID3BQ8IVW6 561 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 TEX11Q8IYF3 940 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 PDILTQ8N807 584 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 HJURPQ8NCD3 748 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 NAXEQ8NCW5 288 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 OR2T6Q8NHC8 308 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 FGFBP3Q8TAT2 258 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 KCNG4Q8TDN1 519 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 ELMOD3Q96FG2 381 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 C7orf26Q96N11 449 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 DACH2Q96NX9 599 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 RBM4BQ9BQ04 359 aaKnown RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 C1QTNF1Q9BXJ1 281 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 SH2D4AQ9H788 454 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 SETD4Q9NVD3 440 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 FLRT3Q9NZU0 649 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 PAK5Q9P286 719 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 TSPYL4Q9UJ04 414 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 PYGO1Q9Y3Y4 419 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 TNIKQ9UKE5 1360 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 MAP3K4Q9Y6R4 1608 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 A0A087WW49 117 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 MED19A0JLT2 244 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-210ENST00000553693 GH2P01242 217 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 CBLP22681 906 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 PSMC4P43686 418 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 NOVP48745 357 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 HSPA2P54652 639 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 ADALQ6DHV7 355 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 PWWP2BQ6NUJ5 590 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 TMTC3Q6ZXV5 915 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 TICAM1Q8IUC6 712 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 CRYBG2Q8N1P7 616 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 ZNF614Q8N883 585 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 MOCOSQ96EN8 888 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 NSL1Q96IY1 281 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 PPM1MQ96MI6 270 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 EGFL8Q99944 293 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 DCTN5Q9BTE1 182 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 HGH1Q9BTY7 390 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 CDK19Q9BWU1 502 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 MUC13Q9H3R2 512 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 UNC45AQ9H3U1 944 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 KAT14Q9H8E8 782 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 IRAK4Q9NWZ3 460 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 SESN1Q9Y6P5 492 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 PTPRMP28827 1452 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 TEX14Q8IWB6 1497 aa3.53□□□□□ -1.84
SCFD1-210ENST00000553693 UACAQ9BZF9 1416 aa3.53□□□□□ -1.85
SCFD1-210ENST00000553693 A8MZ25 164 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 NDUFS4O43181 175 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 HS6ST1O60243 411 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 AP2A2O94973 939 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 NGFP01138 241 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 TPOP07202 933 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 CEBPBP17676 345 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 PPARGP37231 505 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-210ENST00000553693 CDH11P55287 796 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 IRX6P78412 446 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-210ENST00000553693 GPR17Q13304 367 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 RRS1Q15050 365 aaKnown RBP3.52□□□□□ -1.85
SCFD1-210ENST00000553693 TAF13Q15543 124 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 TEAD2Q15562 447 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 GCNT6Q5T4J0 391 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 GKAP1Q5VSY0 366 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-210ENST00000553693 JADE1Q6IE81 842 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 BHLHB9Q6PI77 547 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 SCML4Q8N228 414 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 OR2A14Q96R47 310 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 SLC22A12Q96S37 553 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 GAD1Q99259 594 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 DDOQ99489 341 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 SLC26A6Q9BXS9 759 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 UBA5Q9GZZ9 404 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 PLK3Q9H4B4 646 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 PLCXD1Q9NUJ7 323 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 TMEM181Q9P2C4 612 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 NENFQ9UMX5 172 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 CMAHPQ9Y471 501 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.52□□□□□ -1.85
SCFD1-210ENST00000553693 UHRF1BP1LA0JNW5 1464 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 CUL7Q14999 1698 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 KIF21BO75037 1637 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 BIVM-ERCC5R4GMW8 1640 aa3.52□□□□□ -1.85
SCFD1-210ENST00000553693 CCDC189A1A4V9 331 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 ZNF197O14709 1029 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 RNASEH2AO75792 299 aaKnown RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 SORBS2O94875 1100 aaKnown RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 RAF1P04049 648 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 TRIM49P0CI25 452 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 TRIM49CP0CI26 452 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms