RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 KCNJ16Q9NPI9 418 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 EXOC1Q9NV70 894 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 ABI3Q9P2A4 366 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DNAI1Q9UI46 699 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 BTRCQ9Y297 605 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MEMO1Q9Y316 297 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DNHD1Q96M86 4753 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ELOA3CA0A087WX78 387 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 IGHV5-51A0A0C4DH38 117 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 LOC100289279A0A1B0GTE1 492 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ELOA3DA6NLF2 546 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 VSTM5A8MXK1 200 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 RNF225M0QZC1 329 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 AGPSO00116 658 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PSMD11O00231 422 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 AQP7O14520 342 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 CETN3O15182 167 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 INSIG1O15503 277 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 HTRA2O43464 458 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PROM1O43490 865 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 WIPF1O43516 503 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PRAMEF2O60811 474 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 GRAP2O75791 330 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 RGS9O75916 674 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 RASAL1O95294 804 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PIGNO95427 931 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ZBTB11O95625 1053 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 EML2O95834 649 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 CPP00450 1065 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 HOXD4P09016 255 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 EPB41P11171 864 aaKnown RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PYGMP11217 842 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ADH6P28332 368 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 CAPZBP47756 277 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 TDGF1P3P51864 188 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SLC6A3Q01959 620 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 LRMPQ12912 555 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 RALGDSQ12967 914 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 GTF2H3Q13889 308 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ELOA3BQ3SY89 546 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 TCERG1LQ5VWI1 586 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SHEQ5VZ18 495 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 DENND2CQ68D51 928 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM211Q6ICI0 200 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ARMC6Q6NXE6 501 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SRLQ86TD4 932 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ZDHHC17Q8IUH5 632 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 CARFQ8N187 725 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 AOPEPQ8N6M6 819 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SLC38A9Q8NBW4 561 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SIMC1Q8NDZ2 872 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 CATSPER1Q8NEC5 780 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ELOA3Q8NG57 546 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PHF10Q8WUB8 498 aaKnown RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ZNF606Q8WXB4 792 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 HAS2Q92819 552 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PPP1R14AQ96A00 147 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 VOPP1Q96AW1 172 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SDCCAG3Q96C92 435 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PGAP3Q96FM1 320 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 RMND5BQ96G75 393 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 MAGED4Q96JG8 741 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 NT5C1BQ96P26 610 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 NPY6RQ99463 290 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ZSWIM1Q9BR11 485 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM121Q9BTD3 319 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 NDC1Q9BTX1 674 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 LHPPQ9H008 270 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 BLZF1Q9H2G9 400 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SYNCQ9H7C4 482 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ACTR5Q9H9F9 607 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 GP6Q9HCN6 339 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PLCB1Q9NQ66 1216 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PIGVQ9NUD9 493 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PRR13Q9NZ81 148 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 OGFRQ9NZT2 677 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 UBA2Q9UBT2 640 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 ZNF212Q9UDV6 495 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 OR12D3Q9UGF7 316 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 IP6K2Q9UHH9 426 aa5.03□□□□□ -1.6
CKAP4-203ENST00000553039 LUC7L2Q9Y383 392 aaKnown RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 PTRH2Q9Y3E5 179 aaKnown RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 MORC2Q9Y6X9 1032 aaPredicted RBP5.03□□□□□ -1.6
CKAP4-203ENST00000553039 SEC16AO15027 2179 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CCDC78A2IDD5 438 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 TLCD2A6NGC4 264 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 E9PLN8 166 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CUTAO60888 179 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 KLF7O75840 302 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 ZRANB2O95218 330 aaKnown RBP eCLIP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CAPN1P07384 714 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 EBLN1P0CF75 366 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 BMP4P12644 408 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 UNGP13051 313 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CYP2A7P20853 494 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 VIPR1P32241 457 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 ETV3P41162 512 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 SULT1E1P49888 294 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms