RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PRSS3P2Q8NHM4 247 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 ARRDC2Q8TBH0 407 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 HM13Q8TCT9 377 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 GPT2Q8TD30 523 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 PIGOQ8TEQ8 1089 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 PPP1R13BQ96KQ4 1090 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 EGLN2Q96KS0 407 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 FER1L6-AS2Q96M78 137 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 MSTO1Q9BUK6 570 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 NUP85Q9BW27 656 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 XAB2Q9HCS7 855 aaKnown RBP5.28□□□□□ -1.56
CPSF6-206ENST00000550987 TMEM51Q9NW97 253 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 TMOD3Q9NYL9 352 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 HAO2Q9NYQ3 351 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 UBA2Q9UBT2 640 aaPredicted RBP5.28□□□□□ -1.56
CPSF6-206ENST00000550987 DNAJB4Q9UDY4 337 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 NARFQ9UHQ1 456 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 SRPRBQ9Y5M8 271 aaKnown RBP5.28□□□□□ -1.56
CPSF6-206ENST00000550987 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.28□□□□□ -1.56
CPSF6-206ENST00000550987 FLT1P17948 1338 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 SALL1Q9NSC2 1324 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 EDDM13A0A1B0GTR0 161 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 A0A1W2PR77 199 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 GAGE12JA6NER3 117 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 KCNU1A8MYU2 1149 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 H0Y626 953 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 M0QZ24 198 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 MATN3O15232 486 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 PLRG1O43660 514 aaKnown RBP5.27□□□□□ -1.57
CPSF6-206ENST00000550987 TLR2O60603 784 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 TRUB2O95900 331 aaKnown RBP5.27□□□□□ -1.57
CPSF6-206ENST00000550987 GH2P01242 217 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 CYP19A1P11511 503 aaPredicted RBP5.27□□□□□ -1.57
CPSF6-206ENST00000550987 DDX5P17844 614 aaKnown RBP5.27□□□□□ -1.57
CPSF6-206ENST00000550987 PTAFRP25105 342 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 INHBCP55103 352 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 ST3GAL1Q11201 340 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 INPP5JQ15735 1006 aaPredicted RBP5.27□□□□□ -1.57
CPSF6-206ENST00000550987 CBWD6Q4V339 395 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 CBWD3Q5JTY5 395 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 DCLRE1AQ6PJP8 1040 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 ZNF66Q6ZN08 573 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 SHFQ7M4L6 423 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 ARMC9Q7Z3E5 817 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 LDLRAD3Q86YD5 345 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 AFAP1L1Q8TED9 768 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 TRPC4APQ8TEL6 797 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 TRIB2Q92519 343 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 FNBP1Q96RU3 617 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 DDOQ99489 341 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 SH3GL2Q99962 352 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 KXD1Q9BQD3 176 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 QTRT1Q9BXR0 403 aaKnown RBP5.27□□□□□ -1.57
CPSF6-206ENST00000550987 KCNK15Q9H427 330 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 PPP1R3EQ9H7J1 279 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 UBE2ZQ9H832 354 aaPredicted RBP5.27□□□□□ -1.57
CPSF6-206ENST00000550987 MAP6D1Q9H9H5 199 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 TAS2R14Q9NYV8 317 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 OR6C3Q9NZP0 311 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 SLC9A2Q9UBY0 812 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 STK39Q9UEW8 545 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 TSPYL4Q9UJ04 414 aa5.27□□□□□ -1.57
CPSF6-206ENST00000550987 MAGEB17A8MXT2 336 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 KCNK5O95279 499 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 FTCDO95954 541 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 NUDT3O95989 172 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 EGFP01133 1207 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 PFKFB1P16118 471 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 DNASE1P24855 282 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 ATP5DP30049 168 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 EIF2S3P41091 472 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 ENTPD1P49961 510 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 RAD23BP54727 409 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 MAD2L1Q13257 205 aaPredicted RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 ZXDCQ2QGD7 858 aaPredicted RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 EIF2S3LQ2VIR3 472 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 Q5PR19 223 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 WASHC2DQ5SRD0 308 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 KRT39Q6A163 491 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 SLC18B1Q6NT16 456 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 ANKRD54Q6NXT1 300 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 CAVIN1Q6NZI2 390 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 B3GNT6Q6ZMB0 384 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 DEF8Q6ZN54 512 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 INTS8Q75QN2 995 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 ERN2Q76MJ5 926 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 TRAPPC11Q7Z392 1133 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 HAUS6Q7Z4H7 955 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 LDB1Q86U70 411 aaPredicted RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 FBXO39Q8N4B4 442 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 MSANTD4Q8NCY6 345 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 RBM15BQ8NDT2 890 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 OR1J2Q8NGS2 313 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 TMEM163Q8TC26 289 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 APBB2Q92870 758 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 FERMT1Q9BQL6 677 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 HGH1Q9BTY7 390 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 TMEM39BQ9GZU3 492 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 ISCUQ9H1K1 167 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 SLCO5A1Q9H2Y9 848 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms