RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 GEMP55040 296 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 ADCY2Q08462 1091 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 PLEKHS1Q5SXH7 462 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 FHL5Q5TD97 284 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 KAZNQ674X7 775 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 DUS1LQ6P1R4 473 aaKnown RBP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 RCOR2Q8IZ40 523 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 SLC38A9Q8NBW4 561 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 ACVR1CQ8NER5 493 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 HM13Q8TCT9 377 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 HEXDCQ8WVB3 486 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 ULK4Q96C45 1275 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 RMDN2Q96LZ7 410 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 DPH2Q9BQC3 489 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 GBA3Q9H227 469 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 CHST8Q9H2A9 424 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 ASB8Q9H765 288 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 SOHLH2Q9NX45 425 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 MAP4K5Q9Y4K4 846 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 HYOU1Q9Y4L1 999 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 ALG6Q9Y672 507 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 CACNA1DQ01668 2161 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 POLEQ07864 2286 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 ARGFXA6NJG6 315 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 MAP3K7O43318 606 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 SGTAO43765 313 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 DPM1O60762 260 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 MFAP3LO75121 409 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 AGFG2O95081 481 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 APOC2P02655 101 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 CDH3P22223 829 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 RORAP35398 523 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 PTGIRP43119 386 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 UQCRFS1P47985 274 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 PRLHRP49683 370 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 CCL11P51671 97 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 KRT33BQ14525 404 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 GSE1Q14687 1217 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 C4orf17Q53FE4 359 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 RANBP10Q6VN20 620 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 BBS12Q6ZW61 710 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 MED25Q71SY5 747 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 DET1Q7L5Y6 550 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 VSTM4Q8IW00 320 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-221ENST00000550914 OR4K2Q8NGD2 314 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 DCUN1D1Q96GG9 259 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 RBM41Q96IZ5 413 aaKnown RBP12.5□□□□□ -0.41
PTCH1-221ENST00000550914 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 CUEDC1Q9NWM3 386 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-221ENST00000550914 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 SNX7Q9UNH6 387 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 ARL5AQ9Y689 179 aa12.5□□□□□ -0.41
PTCH1-221ENST00000550914 SNRNP200O75643 2136 aaKnown RBP12.5□□□□□ -0.41
PTCH1-221ENST00000550914 SLC9B1P1A6NJY1 282 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 F5H423 210 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 TMEM63AO94886 807 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 CRTAMO95727 393 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 AGTP01019 485 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 HBQ1P09105 142 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 POLR2CP19387 275 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 GNLYP22749 145 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 ADRA1AP35348 466 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 CD151P48509 253 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 VAV2P52735 878 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 RRADP55042 308 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 XIAPP98170 497 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 ABRQ12979 859 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 CHAF1BQ13112 559 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 NADK2Q4G0N4 442 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 LURAP1LQ8IV03 231 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 CFAP206Q8IYR0 622 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 ENDOVQ8N8Q3 282 aaKnown RBP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 GLIS1Q8NBF1 620 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 OR4E2Q8NGC2 313 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 LCN9Q8WX39 176 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 CLIP3Q96DZ5 547 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 GORASP1Q9BQQ3 440 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 TLR10Q9BXR5 811 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 SRMSQ9H3Y6 488 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 TFB2MQ9H5Q4 396 aaKnown RBP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 ACTR5Q9H9F9 607 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 PLEKHB1Q9UF11 243 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 FKBPLQ9UIM3 349 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 SERTAD3Q9UJW9 196 aa12.49□□□□□ -0.41
PTCH1-221ENST00000550914 AAR2Q9Y312 384 aaKnown RBP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTCH1-221ENST00000550914 IGLV3-16A0A075B6K0 115 aa12.48□□□□□ -0.41
PTCH1-221ENST00000550914 TMEM150CB9EJG8 249 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms