RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 PDPRQ8NCN5 879 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 SLAIN1Q8ND83 568 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 BRSK1Q8TDC3 778 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 GIPC3Q8TF64 312 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 HTRA1Q92743 480 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 HPS1Q92902 700 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 MED31Q9Y3C7 131 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 OTOFQ9HC10 1997 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 E7ENX8 843 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 GNAZP19086 355 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 CCR8P51685 355 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 DSC2Q02487 901 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 AMIGO1Q86WK6 493 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 CCNB2O95067 398 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 ANGPTL1O95841 491 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 ANKRD46Q86W74 232 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 OR5T3Q8NGG3 340 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 ZNF347Q96SE7 839 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 SRMSQ9H3Y6 488 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 PLSCR1O15162 318 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 TLX3O43711 291 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 LRCH4O75427 683 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 HSPA7P48741 367 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 MAPK14Q16539 360 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 ZNF311Q5JNZ3 666 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 TTLQ8NG68 377 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 SLC22A17Q8WUG5 538 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 NMUR2Q9GZQ4 415 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 INTS10Q9NVR2 710 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 RGS17Q9UGC6 210 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 GTF2IRD1Q9UHL9 959 aa12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-212ENST00000550536 DCLK1O15075 740 aa12.33□□□□□ -0.43
RAB3IP-212ENST00000550536 IL7RP16871 459 aa12.33□□□□□ -0.43
RAB3IP-212ENST00000550536 CCDC28BQ9BUN5 200 aa12.33□□□□□ -0.43
RAB3IP-212ENST00000550536 CHMP1AQ9HD42 196 aaPredicted RBP12.33□□□□□ -0.43
RAB3IP-212ENST00000550536 TBC1D24Q9ULP9 559 aa12.33□□□□□ -0.43
RAB3IP-212ENST00000550536 PTGER3P43115 390 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 FAM174BQ3ZCQ3 159 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 OR10H4Q8NGA5 316 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 HERVK_113Q902F9 699 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 STXBP5LQ9Y2K9 1186 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 DUSP11O75319 330 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 LIMK2P53671 638 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 MTTPP55157 894 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 LILRA4P59901 499 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 CYP4F8P98187 520 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 RNASE12Q5GAN4 147 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PGBD2Q6P3X8 592 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PTF1AQ7RTS3 328 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 SERPINA9Q86WD7 417 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 RAB43Q86YS6 212 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 GLB1L3Q8NCI6 653 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 FEM1CQ96JP0 617 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PWWP2AQ96N64 755 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 FAM83DQ9H4H8 585 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 TRMUO75648 421 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 BLKP51451 505 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 SCN1BQ07699 218 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PCDH1Q08174 1060 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PTP4A2Q12974 167 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ZNF567Q8N184 647 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ATAD1Q8NBU5 361 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 LEMD2Q8NC56 503 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 JOSD2Q8TAC2 188 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 HAPLN3Q96S86 360 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 TRIM3O75382 744 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 SCGNO76038 276 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ZBTB48P10074 688 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 C1QTNF8P60827 252 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ING5Q8WYH8 240 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 GAL3ST4Q96RP7 486 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 EOMESO95936 686 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ETS2P15036 469 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ATXN1P54253 815 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 CBX3Q13185 183 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 HSDL1Q3SXM5 330 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PPM1JQ5JR12 505 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 LDB1Q86U70 411 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 CENPNQ96H22 339 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 PCDHAC2Q9Y5I4 1007 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 TAF1P21675 1872 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ZNF432O94892 652 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 CCNE2O96020 404 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 ALPPL2P10696 532 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 COL6A1P12109 1028 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 GBE1Q04446 702 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 GPALPP1Q8IXQ4 340 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 RBM15BQ8NDT2 890 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 CCDC54Q8NEL0 328 aa12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 DNAJA4Q8WW22 397 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-212ENST00000550536 SLC38A4Q969I6 547 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms