RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 VIPP01282 170 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 C9P02748 559 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 RPLP0P05388 317 aaKnown RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 PKMP14618 531 aaKnown RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 GABRB3P28472 473 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 PDHA2P29803 388 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 PBLDP30039 288 aaPredicted RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 CSF2RBP32927 897 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 PLTPP55058 493 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 CFHR1Q03591 330 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ILF2Q12905 390 aaKnown RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 THOC5Q13769 683 aaKnown RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 SPIDRQ14159 915 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 GPR18Q14330 331 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ISXQ2M1V0 245 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 TEDDM1Q5T9Z0 273 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ZNF549Q6P9A3 640 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 TRMT10BQ6PF06 316 aaKnown RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 TMPRSS9Q7Z410 1059 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 SLC26A11Q86WA9 606 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 RASGRP3Q8IV61 690 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 CFAP206Q8IYR0 622 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ZBED8Q8IZ13 594 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ASZ1Q8WWH4 475 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ELMO1Q92556 727 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 GFM1Q96RP9 751 aaKnown RBP11.63□□□□□ -0.55
PFDN5-208ENST00000549995 FUT8Q9BYC5 575 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 NRSN2Q9GZP1 204 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 KIR3DX1Q9H7L2 352 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 MVB12BQ9H7P6 319 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 SEMA5BQ9P283 1151 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 DKK4Q9UBT3 224 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 EPHA6Q9UF33 1036 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ENTPD2Q9Y5L3 495 aa11.63□□□□□ -0.55
PFDN5-208ENST00000549995 ESYT3A0FGR9 886 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 DUX1O43812 170 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 THRAP10827 490 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 CAPZBP47756 277 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 PREPP48147 710 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 CLCN7P51798 805 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 LIMK2P53671 638 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 EIF3BP55884 814 aaKnown RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 OR1D5P58170 312 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 SLC7A5Q01650 507 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 CTBP1Q13363 440 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 TRA2AQ13595 282 aaKnown RBP eCLIP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 RTP5Q14D33 572 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 SEPT7Q16181 437 aaKnown RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 ZNF574Q6ZN55 896 aaPredicted RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 CEP128Q6ZU80 1094 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 NEK10Q6ZWH5 1172 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 OR4D9Q8NGE8 314 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 TMEM159Q96B96 161 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 C12orf66Q96MD2 445 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 SLC38A3Q99624 504 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 AARSD1Q9BTE6 412 aaKnown RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 TSPYL1Q9H0U9 437 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 TFB2MQ9H5Q4 396 aaKnown RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 FBXO6Q9NRD1 293 aaPredicted RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 IARS2Q9NSE4 1012 aaKnown RBP11.62□□□□□ -0.55
PFDN5-208ENST00000549995 KCNK4Q9NYG8 393 aa11.62□□□□□ -0.55
PFDN5-208ENST00000549995 UBA6A0AVT1 1052 aaPredicted RBP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 IQCF5A8MTL0 148 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 ESPNB1AK53 854 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 NIPSNAP2O75323 286 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 CSO75390 466 aaKnown RBP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 SPAG6O75602 509 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 HAUS5O94927 633 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 AHSGP02765 367 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 ANKRD34CP0C6C1 535 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 ERVK-10P10266 1014 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 MLLT3P42568 568 aaPredicted RBP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 CLDN6P56747 220 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 GPX6P59796 221 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 MPP1Q00013 466 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 TIAL1Q01085 375 aaKnown RBP eCLIP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 MGAT5Q09328 741 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 TARDBPQ13148 414 aaKnown RBP eCLIP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 EIF3IQ13347 325 aaKnown RBP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 CUL1Q13616 776 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 TMED2Q15363 201 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 KIF26BQ2KJY2 2108 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 PTRHD1Q6GMV3 140 aaKnown RBP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 TMEM71Q6P5X7 295 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 UNC5DQ6UXZ4 953 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 ANKMY2Q8IV38 441 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 VRK3Q8IV63 474 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 TRIM48Q8IWZ4 208 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 TBC1D21Q8IYX1 336 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 CARFQ8N187 725 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 KRT222Q8N1A0 295 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 EIF1ADQ8N9N8 165 aaKnown RBP11.61□□□□□ -0.55
PFDN5-208ENST00000549995 OR10G6Q8NH81 332 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 OR5K2Q8NHB8 316 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 GIMAP7Q8NHV1 300 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 PYROXD1Q8WU10 500 aa11.61□□□□□ -0.55
PFDN5-208ENST00000549995 TMEM74Q96NL1 305 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms