RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 POU4F1Q01851 419 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 PDAP1Q13442 181 aaKnown RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 GBX1Q14549 363 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 INAVAQ3KP66 663 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 UGT3A1Q6NUS8 523 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 ZCCHC8Q6NZY4 707 aaKnown RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 IYDQ6PHW0 289 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 PAQR3Q6TCH7 311 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 WASH2PQ6VEQ5 465 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 NAXDQ8IW45 347 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SLC35F3Q8IY50 421 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 EPS8L3Q8TE67 593 aaKnown RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 GLMNQ92990 594 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 CAMK1GQ96NX5 476 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 WASH6PQ9NQA3 447 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 CTNNAL1Q9UBT7 734 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SLC24A2Q9UI40 661 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 PLAAQ9Y263 795 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 CFAP20Q9Y6A4 193 aaKnown RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 SKIV2L2P42285 1042 aaKnown RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 HALP42357 657 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 MAZP56270 477 aaKnown RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 PLOD1Q02809 727 aaPredicted RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 TTLL9Q3SXZ7 439 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 OGFOD3Q6PK18 319 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 ADGRD1Q6QNK2 874 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 CMC1Q7Z7K0 106 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 PDZD3Q86UT5 571 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SLC22A15Q8IZD6 547 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 ARL10Q8N8L6 244 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 RHBDD1Q8TEB9 315 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SLC37A2Q8TED4 501 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 APOLD1Q96LR9 279 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 KLHL42Q9P2K6 505 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 GOLGA4Q13439 2230 aaKnown RBP20.73■□□□□ 0.91
VPS29-206ENST00000549578 DMXL1Q9Y485 3027 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 UQCRHLA0A096LP55 91 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 PHGDHO43175 533 aaKnown RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 UQCRHP07919 91 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 H2AFXP16104 143 aaPredicted RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 STMN1P16949 149 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 LIMK1P53667 647 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 IFFO1Q0D2I5 559 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 CAPRIN2Q6IMN6 1127 aaKnown RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 DUS1LQ6P1R4 473 aaKnown RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 TMEM207Q6UWW9 146 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 TAOK1Q7L7X3 1001 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 SFRP1Q8N474 314 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 GPR156Q8NFN8 814 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 SKA2Q8WVK7 121 aaPredicted RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 C12orf66Q96MD2 445 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 INSM2Q96T92 566 aaPredicted RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 IMP3Q9NV31 184 aaKnown RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 ZNF624Q9P2J8 865 aaPredicted RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 PSMC3IPQ9P2W1 217 aaPredicted RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 TBK1Q9UHD2 729 aa20.72■□□□□ 0.91
VPS29-206ENST00000549578 RUVBL2Q9Y230 463 aaKnown RBP20.72■□□□□ 0.91
VPS29-206ENST00000549578 KRT38O76015 456 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 SLC2A4P14672 509 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 ZKSCAN8Q15776 578 aaPredicted RBP20.71■□□□□ 0.91
VPS29-206ENST00000549578 RPE65Q16518 533 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 C14orf28Q4W4Y0 310 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 FBXO38Q6PIJ6 1188 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 FAM181AQ8N9Y4 354 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 FAM122AQ96E09 287 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 TSPAN17Q96FV3 270 aa20.71■□□□□ 0.91
VPS29-206ENST00000549578 LY6G6EA0A0G2JKS1 128 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 KIR2DS5A0A0G2JLQ3 304 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 PRAMEF33A0A0G2JMD5 474 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 A0A0G2JNG1 304 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 TRIM49D1C9J1S8 452 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 KIR2DS3K7RE56 304 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 IFRD1O00458 451 aaPredicted RBP20.7■□□□□ 0.9
VPS29-206ENST00000549578 ALDOAP04075 364 aaKnown RBP20.7■□□□□ 0.9
VPS29-206ENST00000549578 ZNF37AP17032 561 aaPredicted RBP20.7■□□□□ 0.9
VPS29-206ENST00000549578 CNTFP26441 200 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 ACADLP28330 430 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 GMPRP36959 345 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 SLC19A1P41440 591 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 RAB10P61026 200 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 ABRQ12979 859 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 KIR2DS5Q14953 304 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 PIWIL4Q7Z3Z4 852 aaKnown RBP20.7■□□□□ 0.9
VPS29-206ENST00000549578 C17orf82Q86X59 251 aaPredicted RBP20.7■□□□□ 0.9
VPS29-206ENST00000549578 ARL14Q8N4G2 192 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 MAPK15Q8TD08 544 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 EEF1AKMT1Q8WVE0 214 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 LINGO1Q96FE5 620 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 GPAMQ9HCL2 828 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 ARGLU1Q9NWB6 273 aaPredicted RBP20.7■□□□□ 0.9
VPS29-206ENST00000549578 NFS1Q9Y697 457 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 U3KQA8 63 aa20.7■□□□□ 0.9
VPS29-206ENST00000549578 TLDC2A0PJX2 215 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 OR5K4A6NMS3 321 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 TCEA3O75764 348 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 KRT37O76014 449 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 SNRPAP09012 282 aaKnown RBP20.69■□□□□ 0.9
VPS29-206ENST00000549578 MTHFD1P11586 935 aaKnown RBP20.69■□□□□ 0.9
VPS29-206ENST00000549578 ATP5DP30049 168 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 PROX2Q3B8N5 592 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms