RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 AURKBQ96GD4 344 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 MGME1Q9BQP7 344 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 OSBPL10Q9BXB5 764 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 ZFP14Q9HCL3 533 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 SOBPA7XYQ1 873 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 ITGB6P18564 788 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 RAD23AP54725 363 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 YBEYP58557 167 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 PPP2R2BQ00005 443 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 FRA10AC1Q70Z53 315 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 ZNF548Q8NEK5 533 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 ZNF555Q8NEP9 628 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 NSUN3Q9H649 340 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 ACTR8Q9H981 624 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 DNAJB9Q9UBS3 223 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 FBXO10Q9UK96 956 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 BAG5Q9UL15 447 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 RIMKLBQ9ULI2 386 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 ST14Q9Y5Y6 855 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 PLXNA3P51805 1871 aa13.91□□□□□ -0.18
RAPGEF3-218ENST00000548919 FAM92AA1XBS5 289 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 ARNTLO00327 626 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 XPNPEP2O43895 674 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 GDF5P43026 501 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 OR1G1P47890 313 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 RPS24P62847 133 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 HMGCS1Q01581 520 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 GTF2H2Q13888 395 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 SGO1Q5FBB7 561 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 PERM1Q5SV97 790 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 TTC23Q5W5X9 447 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 GTF2H2CQ6P1K8 395 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 NECAB2Q7Z6G3 386 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 RNF168Q8IYW5 571 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 KRTCAP2Q8N6L1 136 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 CLHC1Q8NHS4 586 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 CNIH3Q8TBE1 160 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 SLC13A3Q8WWT9 602 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 FAM162AQ96A26 154 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 IPPKQ9H8X2 491 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 SLC6A13Q9NSD5 602 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 SLC25A37Q9NYZ2 338 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 PAIP2BQ9ULR5 123 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 INSIG1O15503 277 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 LPOP22079 712 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 CDH3P22223 829 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 ALDH4A1P30038 563 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 MAGEA8P43361 318 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 HSPA7P48741 367 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 GP2P55259 537 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 LSM3P62310 102 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 CYP4F3Q08477 520 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 DSC3Q14574 896 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 KIAA0040Q15053 153 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 MSRB3Q8IXL7 192 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 C10orf111Q8N326 155 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 TRPV1Q8NER1 839 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 GTF2H4Q92759 462 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 C8orf48Q96LL4 319 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 UGT2B28Q9BY64 529 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 CRISPLD1Q9H336 500 aa13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 ZFP37Q9Y6Q3 630 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-218ENST00000548919 DYTNA2CJ06 578 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 TMEM221A6NGB7 291 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 ARVCFO00192 962 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 PFKLP17858 780 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 MAPKAPK2P49137 400 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 TTPAP49638 278 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 BTG3Q14201 252 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 SPANXN4Q5MJ08 99 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 GCNT7Q6ZNI0 430 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 NCLNQ969V3 563 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 SH3YL1Q96HL8 342 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 UROC1Q96N76 676 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 PSKH2Q96QS6 385 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 TDRD1Q9BXT4 1180 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 SCUBE2Q9NQ36 999 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 C16orf96A6NNT2 1141 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 F5H5T6 163 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 SLC1A7O00341 560 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 E2F6O75461 281 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 OAZ2O95190 189 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 HPRP00739 348 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 IGLV3-27P01718 113 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 CLCN7P51798 805 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 ILF2Q12905 390 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 MAPKAPK3Q16644 382 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 ALG1LQ6GMV1 187 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 NIPAL1Q6NVV3 410 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 GALNT5Q7Z7M9 940 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 OR8J3Q8NGG0 315 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 MUL1Q969V5 352 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 SEPT5Q99719 369 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 GORASP2Q9H8Y8 452 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 PALMDQ9NP74 551 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 PCDH12Q9NPG4 1184 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms