RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ESX1Q8N693 406 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 LILRA3Q8N6C8 439 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 UBL4BQ8N7F7 174 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 LRRC57Q8N9N7 239 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 FAM71DQ8N9W8 422 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 SIDT2Q8NBJ9 832 aaKnown RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 OR4E2Q8NGC2 313 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 OR13C4Q8NGS5 318 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 GPR150Q8NGU9 434 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 OR2L2Q8NH16 312 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 STARD8Q92502 1023 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 LRRC45Q96CN5 670 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 STAMBPL1Q96FJ0 436 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 C12orf66Q96MD2 445 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 SPATA13Q96N96 652 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 CATSPER2Q96P56 530 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 COPS8Q99627 209 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 MAP3K3Q99759 626 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 BAG1Q99933 345 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 TBL1YQ9BQ87 522 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF71Q9NQZ8 489 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 EPHA6Q9UF33 1036 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 LNPEPQ9UIQ6 1025 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 CROTQ9UKG9 612 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 AMFRQ9UKV5 643 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ACSL5Q9ULC5 683 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 PADI1Q9ULC6 663 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 PACSIN2Q9UNF0 486 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 PIEZO2Q9H5I5 2752 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ANKRD36A6QL64 1941 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 A0A0U1RQJ8 604 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PIPSLA2A3N6 862 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 LDB2O43679 373 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 SGTAO43765 313 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 WISP1O95388 367 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 TIAF1O95411 115 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 METTL18O95568 372 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 FTCDO95954 541 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 SLC35G4P0C7Q5 338 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 EBLN1P0CF75 366 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 FGF5P12034 268 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 POLR2CP19387 275 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 ITGALP20701 1170 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 OAS2P29728 719 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 MC4RP32245 332 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PTPN7P35236 360 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 HADHAP40939 763 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 CDKN1CP49918 316 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 HSD11B2P80365 405 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 XIAPP98170 497 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PDE1BQ01064 536 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 RELBQ01201 579 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 MC1RQ01726 317 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 CDC20Q12834 499 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 KIF5AQ12840 1032 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 MSLNQ13421 630 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 TUBB3Q13509 450 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 SEPT6Q14141 434 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 MAP7Q14244 749 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 ERV3-1Q14264 604 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 ZRANB3Q5FWF4 1079 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 DNTTIP2Q5QJE6 756 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PWWP2BQ6NUJ5 590 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 FBXO38Q6PIJ6 1188 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PRSS42Q7Z5A4 293 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 SNX20Q7Z614 316 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 GAS2L3Q86XJ1 694 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 NXPE1Q8N323 547 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 SPC24Q8NBT2 197 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PHC3Q8NDX5 983 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 APOBEC4Q8WW27 367 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 ZFPM2Q8WW38 1151 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 UBXN4Q92575 508 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 DNAJC1Q96KC8 554 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PPP1R2P1Q96PQ5 205 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 ALS2CR12Q96Q35 445 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 FERD3LQ96RJ6 166 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 CCM2Q9BSQ5 444 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 DESI2Q9BSY9 194 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 RAB33BQ9H082 229 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 ADNPQ9H2P0 1102 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 CLMPQ9H6B4 373 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PDE7BQ9NP56 450 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 FGF21Q9NSA1 209 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 SMOXQ9NWM0 555 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 PIH1D1Q9NWS0 290 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 SLC24A2Q9UI40 661 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 RARRES3Q9UL19 164 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 R3HDM2Q9Y2K5 976 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 COLEC10Q9Y6Z7 277 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 HELZ2Q9BYK8 2649 aaKnown RBP6.54□□□□□ -1.36
SCAF11-211ENST00000547950 LRP4O75096 1905 aa6.54□□□□□ -1.36
SCAF11-211ENST00000547950 TCRBV7S2A1N4TA0A589 114 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 CCDC78A2IDD5 438 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 GSAPA4D1B5 854 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 CDC14CA4D256 554 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 KLHL33A6NCF5 533 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 OR5K3A6NET4 321 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SLC9B1P1A6NJY1 282 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms