RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 PDP1Q9P0J1 537 aaPredicted RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 OGDHLQ9ULD0 1010 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 FAM234BA2RU67 622 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 SERPINI2O75830 405 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 SERPINA1P01009 418 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PPP2R1BP30154 601 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 C18orf21Q32NC0 220 aaPredicted RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 INO80DQ53TQ3 878 aaPredicted RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 SCAMP4Q969E2 229 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PGAP3Q96FM1 320 aaPredicted RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 RPS6KA6Q9UK32 745 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 IKZF3Q9UKT9 509 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 LAMB2P55268 1798 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 A0A1W2PP18 115 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PRKD3O94806 890 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 FOXA1P55317 472 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 NAA20P61599 178 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 OR8H2Q8N162 312 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 GALNT15Q8N3T1 639 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PROX1Q92786 737 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 SUV39H2Q9H5I1 410 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 SUCOQ9UBS9 1254 aaKnown RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 MAP4K5Q9Y4K4 846 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 UNCXA6NJT0 531 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 CXCR6O00574 342 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 SUV39H1O43463 412 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 KDELR3O43731 214 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 GBAP04062 536 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 OCM2P0CE71 109 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 OCMP0CE72 109 aaPredicted RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 CYBAP13498 195 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 SPIBQ01892 262 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 PRKCQQ04759 706 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 RFTN1Q14699 578 aaPredicted RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 C6orf136Q5SQH8 315 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 TMEM220Q6QAJ8 160 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 GOLGA7Q7Z5G4 137 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 HID1Q8IV36 788 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 AADATQ8N5Z0 425 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 CXorf40AQ8TE69 158 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 ZIC5Q96T25 663 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 TCF25Q9BQ70 676 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 NUSAP1Q9BXS6 441 aaKnown RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 DERL2Q9GZP9 239 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 FANCEQ9HB96 536 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 IMP3Q9NV31 184 aaKnown RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 TRBV23OR9-2A0A075B6M9 112 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 FAM220BPB1ANY3 271 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 HAS3O00219 553 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 EPOP01588 193 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 MAGEA11P43364 429 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 SYVN1Q86TM6 617 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 TMEM199Q8N511 208 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 ARL10Q8N8L6 244 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 SLAIN1Q8ND83 568 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 PHF10Q8WUB8 498 aaKnown RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 REPS1Q96D71 796 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 VPS35Q96QK1 796 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 FEM1AQ9BSK4 669 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 TDRD1Q9BXT4 1180 aaKnown RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 EPB41L1Q9H4G0 881 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 OSER1Q9NX31 292 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 DOLKQ9UPQ8 538 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 A0A0G2JN53 185 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 STC2O76061 302 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 FADS2O95864 444 aaKnown RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 DNAJB13P59910 316 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 LRRC66Q68CR7 880 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 THAP5Q7Z6K1 395 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 LINC01465Q8N7H1 131 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 OR2AP1Q8NGE2 309 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 OR4A15Q8NGL6 344 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 ACDQ96AP0 544 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 TSEN34Q9BSV6 310 aaKnown RBP15.4■□□□□ 0.06
CUX1-211ENST00000546411 NLNQ9BYT8 704 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 OSBPL6Q9BZF3 934 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 RAD21L1Q9H4I0 556 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 ATAD3AQ9NVI7 634 aa15.4■□□□□ 0.06
CUX1-211ENST00000546411 IGFBP5P24593 272 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 PGFP49763 221 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 RPS7P62081 194 aaKnown RBP15.39■□□□□ 0.05
CUX1-211ENST00000546411 PTCHD3Q3KNS1 767 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 CYP2U1Q7Z449 544 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 INTS7Q9NVH2 962 aaKnown RBP15.39■□□□□ 0.05
CUX1-211ENST00000546411 ZNF840PA6NDX5 716 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 OAZ2O95190 189 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 SLC6A2P23975 617 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 TTKP33981 857 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 KCTD8Q6ZWB6 473 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 CHSY3Q70JA7 882 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 METTL3Q86U44 580 aaKnown RBP15.39■□□□□ 0.05
CUX1-211ENST00000546411 PPCDCQ96CD2 204 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 VPS4AQ9UN37 437 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 PNMA8CA0A1B0GUJ8 204 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 M0QZQ0 153 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 TOR1BO14657 336 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 PRDX3P30048 256 aaKnown RBP15.39■□□□□ 0.05
CUX1-211ENST00000546411 C2orf80Q0P641 193 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 EPS8Q12929 822 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 OR4F3Q6IEY1 312 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms