RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, human

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-224	ENST00000545688	TMCC2	O75069	709 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	SORBS2	O94875	1100 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	CCNDBP1	O95273	360 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	FRMD6-AS1	P0C7T7	363 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	FAM157C	P0CG43	387 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	SP100	P23497	879 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	KRT2	P35908	639 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	BMX	P51813	675 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	EIF4A2	Q14240	407 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	PWWP2B	Q6NUJ5	590 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	GPALPP1	Q8IXQ4	340 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	ZNF440	Q8IYI8	595 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	L3MBTL4	Q8NA19	623 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	MORC4	Q8TE76	937 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	NUDCD1	Q96RS6	583 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	DCTN5	Q9BTE1	182 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	UBXN6	Q9BZV1	441 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	MLH3	Q9UHC1	1453 aa		4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	TDRD15	B5MCY1	1934 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-224	ENST00000545688	KDM5C	P41229	1560 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	CNTLN	Q9NXG0	1405 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	SCAMP1	O15126	338 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	TOM1	O60784	492 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	EIF3J	O75822	258 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	HMBS	P08397	361 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	HSPA1A	P0DMV8	641 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	HSPA1B	P0DMV9	641 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	NFKBIA	P25963	317 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	CEACAM8	P31997	349 aa	Predicted RBP	4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	CDH11	P55287	796 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	DSCR10	P59022	87 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	PPARD	Q03181	441 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	PCGF3	Q3KNV8	242 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	CFAP77	Q6ZQR2	320 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	LYG1	Q8N1E2	194 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	SCML4	Q8N228	414 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	AFAP1	Q8N556	730 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	IL17RE	Q8NFR9	667 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	MOCOS	Q96EN8	888 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	GIMAP5	Q96F15	307 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	VGLL1	Q99990	258 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	SLA2	Q9H6Q3	261 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	OLFML3	Q9NRN5	406 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	PLCXD1	Q9NUJ7	323 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	GTF2A1L	Q9UNN4	478 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	MTMR6	Q9Y217	621 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	TMEM98	Q9Y2Y6	226 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	PIAS3	Q9Y6X2	628 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	CAMSAP1	Q5T5Y3	1602 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	C3	P01024	1663 aa		4.16	□□□□□ -1.74
SNHG1-224	ENST00000545688	SAMD9	Q5K651	1589 aa		4.15	□□□□□ -1.74
SNHG1-224	ENST00000545688	CFAP74	Q9C0B2	1584 aa		4.15	□□□□□ -1.74
SNHG1-224	ENST00000545688	RAPGEF6	Q8TEU7	1601 aa		4.15	□□□□□ -1.74
SNHG1-224	ENST00000545688	LIPT2	A6NK58	231 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	ZNF197	O14709	1029 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	GPC4	O75487	556 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	ZFAND5	O76080	213 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	H1F0	P07305	194 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	TMEM11	P17152	192 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	SNRPD1	P62314	119 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	MRPS5	P82675	430 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	ZSCAN23	Q3MJ62	389 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	INTS11	Q5TA45	600 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	FAAP20	Q6NZ36	180 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	KLC3	Q6P597	504 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	DNAJC22	Q8N4W6	341 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	ZNF611	Q8N823	705 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	PCYOX1L	Q8NBM8	494 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	ZNF582	Q96NG8	517 aa	Predicted RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	OR2A14	Q96R47	310 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	CABLES2	Q9BTV7	478 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	HGH1	Q9BTY7	390 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	MCRIP2	Q9BUT9	160 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	PGAP2	Q9UHJ9	254 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	SLC7A7	Q9UM01	511 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	EXOG	Q9Y2C4	368 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	PCNX3	Q9H6A9	2034 aa		4.15	□□□□□ -1.75
SNHG1-224	ENST00000545688	ZNF518A	Q6AHZ1	1483 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	IGLV9-49	A0A0B4J1Y8	123 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	IGHV4-61	A0A0C4DH41	118 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	SLCO1B7	G3V0H7	640 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	DNM1L	O00429	736 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	TPD52L2	O43399	206 aa	Known RBP	4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	TMEM63A	O94886	807 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	IGHV4-59	P01825	116 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	ACP2	P11117	423 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	ACTN1	P12814	892 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	CDH2	P19022	906 aa	Predicted RBP	4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	PSMC4	P43686	418 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	RPS18	P62269	152 aa	Known RBP	4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	PPP2R2B	Q00005	443 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	SP3	Q02447	781 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	GAGE2B	Q13066	116 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	P2RY6	Q15077	328 aa		4.14	□□□□□ -1.75
SNHG1-224	ENST00000545688	GAGE2E	Q4V326	116 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms