RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CLPPQ16740 277 aaPredicted RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 ZNF284Q2VY69 593 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 C10orf62Q5T681 223 aaPredicted RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 CCDC186Q7Z3E2 898 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 SCD5Q86SK9 330 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 TMEM110Q86TL2 294 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 CIARTQ8N365 385 aaPredicted RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 ARHGAP18Q8N392 663 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.66□□□□□ -1.34
LDHA-223ENST00000545215 GPATCH11Q8N954 259 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 SPC24Q8NBT2 197 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 NETO2Q8NC67 525 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 C1orf131Q8NDD1 294 aaKnown RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 SLC35F5Q8WV83 523 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 IRGQQ8WZA9 623 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 TFAP2BQ92481 460 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 RAX2Q96IS3 184 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 AGAP3Q96P47 875 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 SLC2A13Q96QE2 648 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 PPP1R9BQ96SB3 815 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 CDK5RAP1Q96SZ6 601 aaKnown RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 SECISBP2Q96T21 854 aaKnown RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 BAG1Q99933 345 aaPredicted RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 SYT11Q9BT88 431 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 C19orf24Q9BVV8 132 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 SYNCQ9H7C4 482 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 LRRC4Q9HBW1 653 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 CNGB3Q9NQW8 809 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 CLIC5Q9NZA1 410 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 ARMCX1Q9P291 453 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 IPO11Q9UI26 975 aaKnown RBP6.66□□□□□ -1.34
LDHA-223ENST00000545215 RASAL2Q9UJF2 1139 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 TMPRSS11EQ9UL52 423 aa6.66□□□□□ -1.34
LDHA-223ENST00000545215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 UBA6A0AVT1 1052 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 TTC36A6NLP5 189 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 B4GAT1O43505 415 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 LCA5LO95447 670 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 IL1BP01584 269 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 HRGP04196 525 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 GLI1P08151 1106 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 PNMA6AP0CW24 399 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 UNGP13051 313 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 DESP17661 470 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 IGFBP2P18065 325 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 RHCEP18577 417 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 MMP8P22894 467 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 CORO1AP31146 461 aaKnown RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 MAN1A1P33908 653 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 GABRB2P47870 512 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 SMSP52788 366 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 METAP1P53582 386 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 GSCP56915 257 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 NOMO3P69849 1222 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 MC2RQ01718 297 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 PDCLQ13371 301 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 PDE1CQ14123 709 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 MUM1Q2TAK8 710 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 RAB41Q5JT25 222 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 TPRG1LQ5T0D9 272 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 CERCAMQ5T4B2 595 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 AGBL4Q5VU57 503 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 CES4AQ5XG92 561 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 ACAD10Q6JQN1 1059 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 NEK5Q6P3R8 708 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 ALKBH5Q6P6C2 394 aaKnown RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 WDR59Q6PJI9 974 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 IGFL3Q6UXB1 125 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 CEACAM20Q6UY09 585 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 KYAT3Q6YP21 454 aaKnown RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 BEND5Q7L4P6 421 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 ARCQ7LC44 396 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 ZNF571Q7Z3V5 609 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 C11orf96Q7Z7L8 435 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 CUZD1Q86UP6 607 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 PIGZQ86VD9 579 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 PHF13Q86YI8 300 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 WFDC3Q8IUB2 231 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 SPPL2CQ8IUH8 684 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 CILP2Q8IUL8 1156 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 LYSMD2Q8IV50 215 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 LRRC8AQ8IWT6 810 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 SIX6OS1Q8N1H7 587 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 KDM1BQ8NB78 822 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 ZBTB34Q8NCN2 500 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 GPR156Q8NFN8 814 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 SLC30A5Q8TAD4 765 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 GRHL3Q8TE85 626 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 DDI1Q8WTU0 396 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 CTRCQ99895 268 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 SLX1AQ9BQ83 275 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 ZNF559Q9BR84 538 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 NUDT22Q9BRQ3 303 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 NHEJ1Q9H9Q4 299 aaPredicted RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 ABCB8Q9NUT2 735 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 SEPT11Q9NVA2 429 aaKnown RBP6.65□□□□□ -1.35
LDHA-223ENST00000545215 ASNSD1Q9NWL6 643 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 GGA2Q9UJY4 613 aa6.65□□□□□ -1.35
LDHA-223ENST00000545215 INTUQ9ULD6 942 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms