RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ITGALP20701 1170 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 ECHS1P30084 290 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 PRAMEP78395 509 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 NFKB2Q00653 900 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 NFATC2Q13469 925 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 ITGA9Q13797 1035 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 CLCA4Q14CN2 919 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 TBR1Q16650 682 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 TMEM164Q5U3C3 297 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 PDPK2PQ6A1A2 396 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 AFTPHQ6ULP2 937 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 TAS2R42Q7RTR8 314 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 PRICKLE2Q7Z3G6 844 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 SNX20Q7Z614 316 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 TMEM135Q86UB9 458 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 ZBED8Q8IZ13 594 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 BMPERQ8N8U9 685 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 AGBL5Q8NDL9 886 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 GDAP1Q8TB36 358 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 DTX3LQ8TDB6 740 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 PEX13Q92968 403 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 NKD1Q969G9 470 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 GLYATL1Q969I3 302 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 VPS35Q96QK1 796 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 TAAR9Q96RI9 348 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 C19orf43Q9BQ61 176 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 DDA1Q9BW61 102 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 SLC12A9Q9BXP2 914 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 TRIM4Q9C037 500 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 ANKZF1Q9H8Y5 726 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 OCIAD1Q9NX40 245 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 KCNK4Q9NYG8 393 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 IL1RAPL1Q9NZN1 696 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 VPS18Q9P253 973 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 PDP2Q9P2J9 529 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 CRLS1Q9UJA2 301 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 NFU1Q9UMS0 254 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 PRKAB1Q9Y478 270 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 PCDHB11Q9Y5F2 797 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 ZCWPW2A0A1B0GU75 182 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 GOLGA8KD6RF30 607 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 GOLGA8TH3BQL2 631 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 TERTO14746 1132 aaKnown RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 ZW10O43264 779 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 USP1O94782 785 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 SLC25A14O95258 325 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 POLBP06746 335 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 ARNTP27540 789 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 FOXN2P32314 431 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 ARCN1P48444 511 aaKnown RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 GPLD1P80108 840 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 CACNG1Q06432 222 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 BIRC2Q13490 618 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 CUL1Q13616 776 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 SEMA3AQ14563 771 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 KHDC1Q4VXA5 237 aaKnown RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 FASTKD1Q53R41 847 aaKnown RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 GPRC6AQ5T6X5 926 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 ARMC3Q5W041 872 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 KIAA0930Q6ICG6 404 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 TMEM71Q6P5X7 295 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 XKR5Q6UX68 686 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 UNC5AQ6ZN44 842 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 CAPN12Q6ZSI9 719 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 LDB1Q86U70 411 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 PHYKPLQ8IUZ5 450 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 GSPT2Q8IYD1 628 aaKnown RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 PIANPQ8IYJ0 282 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 UNC5BQ8IZJ1 945 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 OR4L1Q8NH43 312 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 NAT14Q8WUY8 206 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 LRRC39Q96DD0 335 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 C9orf72Q96LT7 481 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 DPYSL5Q9BPU6 564 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 CLMPQ9H6B4 373 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 PLAC1Q9HBJ0 212 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 C20orf96Q9NUD7 363 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 MARCH4Q9P2E8 410 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 TBC1D29Q9UFV1 150 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 ZC3H7BQ9UGR2 993 aaKnown RBP12.23□□□□□ -0.45
ACTN1-206ENST00000544964 FAM169AQ9Y6X4 670 aa12.23□□□□□ -0.45
ACTN1-206ENST00000544964 TRBV5-4A0A0C4DH59 114 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 AGAP14A8MT82 685 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 B4E171 279 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 EIF3HO15372 352 aaKnown RBP eCLIP12.22□□□□□ -0.45
ACTN1-206ENST00000544964 CD3EAPO15446 510 aaKnown RBP12.22□□□□□ -0.45
ACTN1-206ENST00000544964 DUX1O43812 170 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 WISP1O95388 367 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 F7P08709 466 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-206ENST00000544964 LIFP15018 202 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 PAMP19021 973 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 TSPAN7P41732 249 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 MAGEA4P43358 317 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 HHEXQ03014 270 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 CBLBQ13191 982 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 CRYMQ14894 314 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 ERCC6LQ2NKX8 1250 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms