RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 GNAZP19086 355 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 TIE1P35590 1138 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 TPGS2Q68CL5 300 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 SNX20Q7Z614 316 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 PMEPA1Q969W9 287 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 CDKN2AIPNLQ96HQ2 116 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 BCO2Q9BYV7 579 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 CTPS2Q9NRF8 586 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 SIX4Q9UIU6 781 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 ITM2AO43736 263 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 WFS1O76024 890 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 ASLP04424 464 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 IFNW1P05000 195 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 AKT2P31751 481 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 HMGCS1Q01581 520 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 LACTB2Q53H82 288 aaPredicted RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 UBR7Q8N806 425 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 PEX2P28328 305 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 GATMP50440 423 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 CDH12P55289 794 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 MBLAC2Q68D91 279 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 TMEM214Q6NUQ4 689 aaKnown RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 Q6ZVU0 165 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 KCT2Q8NC54 265 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 GTPBP3Q969Y2 492 aaKnown RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 FCRL4Q96PJ5 515 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 MAGEB17A8MXT2 336 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 IDH3BO43837 385 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 MGRN1O60291 552 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 MZT2BQ6NZ67 158 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 PIM3Q86V86 326 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 GAL3ST4Q96RP7 486 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 SMOQ99835 787 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 RIOK2Q9BVS4 552 aaKnown RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 SRMSQ9H3Y6 488 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 CCNB1IP1Q9NPC3 277 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 SLC26A3P40879 764 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 SLC25A11Q02978 314 aaKnown RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 GPM6BQ13491 265 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 LAPTM5Q13571 262 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 LARS2Q15031 903 aaKnown RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 CXXC5Q7LFL8 322 aaKnown RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 OSBPL2Q9H1P3 480 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 ZNF395Q9H8N7 513 aaPredicted RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 TMEM27Q9HBJ8 222 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 PCDHGB3Q9Y5G1 929 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 SHOX2O60902 331 aaPredicted RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 THRBP10828 461 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 ACP5P13686 325 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 GRB14Q14449 540 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 CDCA2Q69YH5 1023 aaPredicted RBP12.61□□□□□ -0.39
CHD4-211ENST00000544484 AMZ2Q86W34 360 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 ACDQ96AP0 544 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 CNPPD1Q9BV87 410 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 IKZF2Q9UKS7 526 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 PCDHGA11Q9Y5H2 935 aa12.61□□□□□ -0.39
CHD4-211ENST00000544484 FAM86C2PA6NEL3 165 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 UGT2B11O75310 529 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 IFNGP01579 166 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 MYCLP1P12525 358 aaPredicted RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 SLC11A1P49279 550 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 PSMD4P55036 377 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 UBXN2BQ14CS0 331 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 NDUFA9Q16795 377 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 DCAKDQ8WVC6 231 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 RBM18Q96H35 190 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 TMEM138Q9NPI0 162 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 CASKO14936 926 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 SNAI1O95863 264 aaPredicted RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 CREB5Q02930 508 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 RFTN1Q14699 578 aaPredicted RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 NRSN1Q8IZ57 195 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 RBM4BQ9BQ04 359 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 RBM4Q9BWF3 364 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 TRPS1Q9UHF7 1281 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 KCTD3Q9Y597 815 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 CFAP20Q9Y6A4 193 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 WASF2Q9Y6W5 498 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 IGFALSP35858 605 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 RPS9P46781 194 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 CHRNA6Q15825 494 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 ZNF792Q3KQV3 632 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 RNASE12Q5GAN4 147 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 LDLRAP1Q5SW96 308 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 GDPD4Q6W3E5 623 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 AHSA2Q719I0 299 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 KCTD13Q8WZ19 329 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 IL12RB2Q99665 862 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 STON1Q9Y6Q2 735 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 RHPN2P1A8MT19 583 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 K7EPI3 171 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms