RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SKIV2L2P42285 1042 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 DUSP3P51452 185 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 LIMK2P53671 638 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KRT33BQ14525 404 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PROX2Q3B8N5 592 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 XKR5Q6UX68 686 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PIP4P1Q86T03 277 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PIM3Q86V86 326 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 VRK3Q8IV63 474 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SFRP1Q8N474 314 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ARL14Q8N4G2 192 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC44A1Q8WWI5 657 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 INPP5DQ92835 1189 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RMDN2Q96LZ7 410 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MCMBPQ9BTE3 642 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 OR52A5Q9H2C5 316 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 EPB41L4BQ9H329 900 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 LATS2Q9NRM7 1088 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC39A10Q9ULF5 831 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PADI4Q9UM07 663 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MED16Q9Y2X0 877 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MTO1Q9Y2Z2 717 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 DHRS7Q9Y394 339 aa14.16□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RHPN2P1A8MT19 583 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TNFSF14O43557 240 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CBFA2T3O75081 653 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GPC4O75487 556 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLCO2B1O94956 709 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 VIPP01282 170 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ITGA2BP08514 1039 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CKMT1AP12532 417 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CKMT2P17540 419 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FDXRP22570 491 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 POU4F1Q01851 419 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 HHEXQ03014 270 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 USP10Q14694 798 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RPE65Q16518 533 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PDZD3Q86UT5 571 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC22A15Q8IZD6 547 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 AVL9Q8NBF6 648 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ACVR1CQ8NER5 493 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 BAHD1Q8TBE0 780 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CD200R1Q8TD46 325 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GPR22Q99680 433 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC30A3Q99726 388 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 OLFM1Q99784 485 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ZNF624Q9P2J8 865 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 LRIT1Q9P2V4 623 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CPNE7Q9UBL6 633 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CDYLQ9Y232 598 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PTPRZ1P23471 2315 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CTIFO43310 598 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MTHFD1P11586 935 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GLB1P16278 677 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 STMN1P16949 149 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 XRCC1P18887 633 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC19A1P41440 591 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RGS4P49798 205 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TAS2R39P59534 338 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TIAL1Q01085 375 aaKnown RBP eCLIP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ABRQ12979 859 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 DNAJC3Q13217 504 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TRIP6Q15654 476 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ACSBG2Q5FVE4 666 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CAPRIN2Q6IMN6 1127 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 DUS1LQ6P1R4 473 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GUSBP11Q6P575 273 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 EFL1Q7Z2Z2 1120 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 C17orf82Q86X59 251 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CPNE9Q8IYJ1 553 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 MYRIPQ8NFW9 859 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 OR6C4Q8NGE1 309 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CFAP61Q8NHU2 1237 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GIMAP7Q8NHV1 300 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TFGQ92734 400 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TSPAN17Q96FV3 270 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FERD3LQ96RJ6 166 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RTKNQ9BST9 563 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CAB39LQ9H9S4 337 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KLHL42Q9P2K6 505 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ASF1AQ9Y294 204 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 HEBP2Q9Y5Z4 205 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 COLEC10Q9Y6Z7 277 aa14.15□□□□□ -0.14
TNFRSF1A-216ENST00000543995 LY6G6EA0A0G2JKS1 128 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 EME2A4GXA9 379 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CCDC151A5D8V7 595 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TM4SF5O14894 197 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NUDT21O43809 227 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SHBGP04278 402 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CBSLP0DN79 551 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CSRP1P21291 193 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CD9P21926 228 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CBSP35520 551 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 FASLGP48023 281 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PPM1FP49593 454 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SERPINB9P50453 376 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NOVA1P51513 510 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms