RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 MT-ND5P03915 603 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 MBL2P11226 248 aaPredicted RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 MSNP26038 577 aaKnown RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 SDC4P31431 198 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 CCR1P32246 355 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 EIF2DP41214 584 aaKnown RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 MAGEA9P43362 315 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 PTPN9P43378 593 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 IFNAR2P48551 515 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 THBS3P49746 956 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 FCHO2Q0JRZ9 810 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 HTR4Q13639 388 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 PIGHQ14442 188 aaPredicted RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 TEAD2Q15562 447 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 C4orf46Q504U0 113 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 DCAF6Q58WW2 860 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 FAM78AQ5JUQ0 283 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 CCDC122Q5T0U0 273 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 MPP7Q5T2T1 576 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 TAF3Q5VWG9 929 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 NAA35Q5VZE5 725 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 OR6B2Q6IFH4 312 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 DNAJC24Q6P3W2 148 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 DCUN1D2Q6PH85 259 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 LRRC31Q6UY01 552 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 MON1BQ7L1V2 547 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 STRADAQ7RTN6 431 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 ZNF571Q7Z3V5 609 aaPredicted RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 GAS2L3Q86XJ1 694 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 ARID3BQ8IVW6 561 aaPredicted RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 SFTPA1Q8IWL2 248 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 MCOLN2Q8IZK6 566 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 WDTC1Q8N5D0 677 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 SLC15A4Q8N697 577 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 SIRT6Q8N6T7 355 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 MAB21L3Q8N8X9 362 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 ATP6V0D2Q8N8Y2 350 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 OR56A3Q8NH54 315 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 ITFG1Q8TB96 612 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 BPIFB1Q8TDL5 484 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 CSGALNACT1Q8TDX6 532 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 FAM149B1Q96BN6 582 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 RPGRIP1Q96KN7 1286 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 BTN2A3PQ96KV6 586 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 SNX22Q96L94 193 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 C1orf74Q96LT6 269 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 SIGLEC11Q96RL6 698 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 PRR25Q96S07 402 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 CPXM1Q96SM3 734 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 BAG1Q99933 345 aaPredicted RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 MESP1Q9BRJ9 268 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 CNPY3Q9BT09 278 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 SYT11Q9BT88 431 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 SLC2A11Q9BYW1 496 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 ULBP1Q9BZM6 244 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 TSGA10Q9BZW7 698 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 C8orf33Q9H7E9 229 aaPredicted RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 NHEJ1Q9H9Q4 299 aaPredicted RBP4.5□□□□□ -1.69
MDM2-228ENST00000542502 PRDM16Q9HAZ2 1276 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 TRPC7Q9HCX4 862 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 HCFC1R1Q9NWW0 138 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 MYO1AQ9UBC5 1043 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 WNT16Q9UBV4 365 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 AMFRQ9UKV5 643 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 PCDHGB2Q9Y5G2 931 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 UNC80Q8N2C7 3258 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 DOCK6Q96HP0 2047 aa4.5□□□□□ -1.69
MDM2-228ENST00000542502 TRIOO75962 3097 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 C5orf42Q9H799 3197 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 CXorf51AA0A1B0GTR3 108 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 YJEFN3A6XGL0 299 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 HEPACAM2A8MVW5 462 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 BTNL10A8MVZ5 291 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 E7ENQ6 273 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 PYCARD-AS1I3L0S3 204 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 PAPSS1O43252 624 aaPredicted RBP4.49□□□□□ -1.69
MDM2-228ENST00000542502 ZSCAN12O43309 604 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 COCHO43405 550 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 HCRTO43612 131 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 TIMM44O43615 452 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 ZNF189O75820 626 aaPredicted RBP4.49□□□□□ -1.69
MDM2-228ENST00000542502 LCA5LO95447 670 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 ALPLP05186 524 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 PTMAP06454 111 aaKnown RBP4.49□□□□□ -1.69
MDM2-228ENST00000542502 ANXA2P07355 339 aaKnown RBP4.49□□□□□ -1.69
MDM2-228ENST00000542502 PDGFRAP16234 1089 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 CEBPBP17676 345 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 CHRNB2P17787 502 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 CETN2P41208 172 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 CCR2P41597 374 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 SLC1A1P43005 524 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 RGS7P49802 495 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 DGKEP52429 567 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 HADHBP55084 474 aaKnown RBP4.49□□□□□ -1.69
MDM2-228ENST00000542502 WNT3P56703 355 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 SRSF1Q07955 248 aaKnown RBP eCLIP4.49□□□□□ -1.69
MDM2-228ENST00000542502 KIF5AQ12840 1032 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 MTF1Q14872 753 aa4.49□□□□□ -1.69
MDM2-228ENST00000542502 HADHQ16836 314 aaKnown RBP4.49□□□□□ -1.69
MDM2-228ENST00000542502 MPEG1Q2M385 716 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms