RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TBC1D3EA0A087X179 549 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 TBC1D3KA0A087X1G2 549 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 TBC1D3FA6NER0 549 aaPredicted RBP24.05■■□□□ 1.44
TTC3-225ENST00000540756 TBC1D3LB9A6J9 549 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 RNGTTO60942 597 aaKnown RBP24.05■■□□□ 1.44
TTC3-225ENST00000540756 TBC1D3HP0C7X1 549 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 RPIAP49247 311 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 PPP2CBP62714 309 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 PPP2CAP67775 309 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 CDK3Q00526 305 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 TBC1D3GQ6DHY5 549 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 TBC1D3CQ6IPX1 549 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 ADAMTSL4Q6UY14 1074 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 TBC1D3Q8IZP1 549 aaPredicted RBP24.05■■□□□ 1.44
TTC3-225ENST00000540756 TP53I13Q8NBR0 393 aaPredicted RBP24.05■■□□□ 1.44
TTC3-225ENST00000540756 OR52B6Q8NGF0 335 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 CFAP61Q8NHU2 1237 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 CDK15Q96Q40 435 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 FZD3Q9NPG1 666 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 C2orf42Q9NWW7 574 aa24.05■■□□□ 1.44
TTC3-225ENST00000540756 TCRBV21S2A2A0A5A6 115 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 SLC5A10A0PJK1 596 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 SNUPNO95149 360 aaKnown RBP24.04■■□□□ 1.44
TTC3-225ENST00000540756 RPS21P63220 83 aaKnown RBP24.04■■□□□ 1.44
TTC3-225ENST00000540756 ACTN3Q08043 901 aaPredicted RBP24.04■■□□□ 1.44
TTC3-225ENST00000540756 SYTL3Q4VX76 610 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 TMEM259Q4ZIN3 620 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 TMEM198Q66K66 360 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 SYVN1Q86TM6 617 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 MYOCQ99972 504 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 CCDC106Q9BWC9 280 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 C1QTNF2Q9BXJ5 285 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 FBRSQ9HAH7 460 aa24.04■■□□□ 1.44
TTC3-225ENST00000540756 G3BP2Q9UN86 482 aaKnown RBP24.04■■□□□ 1.44
TTC3-225ENST00000540756 CAPN14A8MX76 684 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 PRR5-ARHGAP8B1AHC4 643 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 SLCO1B7G3V0H7 640 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 EIF3FO00303 357 aaPredicted RBP24.03■■□□□ 1.44
TTC3-225ENST00000540756 QSOX1O00391 747 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 SDHDO14521 159 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 KPNA5O15131 536 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 UNC5CO95185 931 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 S100BP04271 92 aaPredicted RBP24.03■■□□□ 1.44
TTC3-225ENST00000540756 NCF2P19878 526 aaPredicted RBP24.03■■□□□ 1.44
TTC3-225ENST00000540756 HK2P52789 917 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 ARHGAP8P85298 464 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 BCL7AQ4VC05 210 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 CFAP206Q8IYR0 622 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 SLC12A9Q9BXP2 914 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 CIDEBQ9UHD4 219 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 MMP17Q9ULZ9 603 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 DNAJC15Q9Y5T4 150 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 GFYI3L273 518 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 MPC1LP0DKB6 136 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 CD1EP15812 388 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 PCBP2Q15366 365 aaKnown RBP eCLIP24.03■■□□□ 1.442e-8■■■■■ 41.9
TTC3-225ENST00000540756 RBBP7Q16576 425 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 FBXO43Q4G163 708 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 KIF2BQ8N4N8 673 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 TMEM159Q96B96 161 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 SLC17A9Q9BYT1 436 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 ZCCHC2Q9C0B9 1178 aaKnown RBP24.03■■□□□ 1.44
TTC3-225ENST00000540756 EPHX3Q9H6B9 360 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 NOL11Q9H8H0 719 aaKnown RBP24.03■■□□□ 1.44
TTC3-225ENST00000540756 RDH14Q9HBH5 336 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 PARVBQ9HBI1 364 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 ARL15Q9NXU5 204 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 TMCO1Q9UM00 188 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 TIMM22Q9Y584 194 aa24.03■■□□□ 1.44
TTC3-225ENST00000540756 CCDC22O60826 627 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 GABRG2P18507 467 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 AGERQ15109 404 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 MLF2Q15773 248 aaPredicted RBP24.02■■□□□ 1.44
TTC3-225ENST00000540756 TTC31Q49AM3 519 aaPredicted RBP24.02■■□□□ 1.44
TTC3-225ENST00000540756 EOGTQ5NDL2 527 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 GOLGA7Q7Z5G4 137 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 C11orf96Q7Z7L8 435 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 MARK4Q96L34 752 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 C3orf30Q96M34 536 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 TM7SF3Q9NS93 570 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 WWOXQ9NZC7 414 aa24.02■■□□□ 1.44
TTC3-225ENST00000540756 LOC730098B7Z3J9 87 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 SLC31A1O15431 190 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 ACSL1P33121 698 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 SGCGQ13326 291 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 NXNQ6DKJ4 435 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 CLYBLQ8N0X4 340 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 HMGB4Q8WW32 186 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 ATP6AP2A0A1C7CYW4 349 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 AZIN1O14977 448 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 CCNT2O60583 730 aaKnown RBP24.01■■□□□ 1.43
TTC3-225ENST00000540756 ATP6AP2O75787 350 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 POP7O75817 140 aaKnown RBP24.01■■□□□ 1.43
TTC3-225ENST00000540756 MATN4O95460 622 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 C8GP07360 202 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 FGF4P08620 206 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 ACADMP11310 421 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 CCSMST1Q4G0I0 132 aa24.01■■□□□ 1.43
TTC3-225ENST00000540756 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.01■■□□□ 1.43
TTC3-225ENST00000540756 SULT1C3Q6IMI6 304 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms