RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 GP5P40197 560 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 RPS5P46782 204 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 EPS8Q12929 822 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 SEMA3BQ13214 749 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 LAPTM5Q13571 262 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 HADHQ16836 314 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 EML3Q32P44 896 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 EEF1DP3Q658K8 133 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 GLYATQ6IB77 296 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ZPBP2Q6X784 338 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 STK32CQ86UX6 486 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 SERINC5Q86VE9 423 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 RETREG3Q86VR2 466 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TAGAPQ8N103 731 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PQLC3Q8N755 202 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 CCNYL1Q8N7R7 359 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TBATAQ96M53 351 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TNKS2Q9H2K2 1166 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PPA2Q9H2U2 334 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 EXD2Q9NVH0 621 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 PRMT7Q9NVM4 692 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ASNSD1Q9NWL6 643 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 ZNF224Q9NZL3 707 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 FAM8A1Q9UBU6 413 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 KLF15Q9UIH9 416 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 STOML2Q9UJZ1 356 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 TLK1Q9UKI8 766 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 MKLN1Q9UL63 735 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 STYXL1Q9Y6J8 313 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 V9GYQ6 96 aa9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 KIAA0100Q14667 2235 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-243ENST00000540387 UBDO15205 165 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF623O75123 536 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 FGF18O76093 207 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CNTN5O94779 1100 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CTSHP09668 335 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CD36P16671 472 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 TNNI3P19429 210 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 KELP23276 732 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 GNPDA1P46926 289 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 MASP1P48740 699 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CLK1P49759 484 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CDC42EP1Q00587 391 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 PSMD5Q16401 504 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ZBTB37Q5TC79 503 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 PIK3R6Q5UE93 754 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 TMEM81Q6P7N7 255 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ZYG11AQ6WRX3 759 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CLEC14AQ86T13 490 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 TCTE3Q8IZS6 198 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 PLD5Q8N7P1 536 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 YIPF7Q8N8F6 280 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF557Q8N988 423 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 SPPL2BQ8TCT7 592 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 LRRN4Q8WUT4 740 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ROPN1LQ96C74 230 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 MBOAT4Q96T53 435 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 SEPHS2Q99611 448 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 APOL4Q9BPW4 351 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 FAM213AQ9BRX8 229 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CDADC1Q9BWV3 514 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ACE2Q9BYF1 805 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 AMBRA1Q9C0C7 1298 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 NXF2Q9GZY0 626 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CMTM6Q9NX76 183 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CCDC59Q9P031 241 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ADGRE2Q9UHX3 823 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 SCML1Q9UN30 329 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 A3GALT2U3KPV4 340 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 UPK1AO00322 258 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 EEF2KO00418 725 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 DSCR3O14972 297 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 RGS5O15539 181 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 METTL18O95568 372 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 HLA-DRAP01903 254 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 FTH1P02794 183 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 F7P08709 466 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 DARSP14868 501 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 NCK1P16333 377 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ARF4P18085 180 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ITGALP20701 1170 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 TGFBR2P37173 567 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 HNF4AP41235 474 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ISL1P61371 349 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 FADDQ13158 208 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 FAM187BQ17R55 369 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 LAMTOR1Q6IAA8 161 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 SLFN12LQ6IEE8 588 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 TYW3Q6IPR3 259 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 OR8H2Q8N162 312 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF555Q8NEP9 628 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 PJA1Q8NG27 643 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 NCLNQ969V3 563 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 ISL2Q96A47 359 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 TMCO6Q96DC7 493 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 RTP4Q96DX8 246 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 MSTO1Q9BUK6 570 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 DNAI2Q9GZS0 605 aa9.33□□□□□ -0.92
CTNNA1-243ENST00000540387 CAB39LQ9H9S4 337 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms