RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CASS4Q9NQ75 786 aa16.34■□□□□ 0.21
DDB1-215ENST00000539712 SLC2A6Q9UGQ3 507 aa16.34■□□□□ 0.21
DDB1-215ENST00000539712 OR6C74A6NCV1 312 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 GOLGA6L6A8MZA4 724 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 B8ZZF3 427 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 SPAG6O75602 509 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 MSNP26038 577 aaKnown RBP16.33■□□□□ 0.2
DDB1-215ENST00000539712 RPL22P35268 128 aaKnown RBP16.33■□□□□ 0.2
DDB1-215ENST00000539712 FDFT1P37268 417 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 KPNA2P52292 529 aaKnown RBP16.33■□□□□ 0.2
DDB1-215ENST00000539712 ACVR1Q04771 509 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 CDH17Q12864 832 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 CCNG2Q16589 344 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 SKIDA1Q1XH10 827 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDB1-215ENST00000539712 DRICH1Q6PGQ1 229 aaPredicted RBP16.33■□□□□ 0.2
DDB1-215ENST00000539712 ZNF534Q76KX8 674 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 D2HGDHQ8N465 521 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 ESX1Q8N693 406 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 GALNT6Q8NCL4 622 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 PHC3Q8NDX5 983 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 OR4E2Q8NGC2 313 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 RANBP9Q96S59 729 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 CD180Q99467 661 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 RAB6BQ9NRW1 208 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 STARD5Q9NSY2 213 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 COLEC10Q9Y6Z7 277 aa16.33■□□□□ 0.2
DDB1-215ENST00000539712 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 TLCD2A6NGC4 264 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 FLNBO75369 2602 aaKnown RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 KIAA0754O94854 1291 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 AP2A2O94973 939 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 EBLN1P0CF75 366 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 PREPP48147 710 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 ARCN1P48444 511 aaKnown RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 CD151P48509 253 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 RPA4Q13156 261 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 GSE1Q14687 1217 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 KCTD19Q17RG1 926 aaPredicted RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 DNTTIP2Q5QJE6 756 aaKnown RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 TSTD2Q5T7W7 516 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 PWWP2BQ6NUJ5 590 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 FBXO38Q6PIJ6 1188 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 C6orf15Q6UXA7 325 aaPredicted RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 PACS1Q6VY07 963 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 DNAAF3Q8N9W5 541 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 ACVR1CQ8NER5 493 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 HDAC10Q969S8 669 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 AKIRIN1Q9H9L7 192 aaPredicted RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 ASH1LQ9NR48 2969 aaKnown RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 RIMKLBQ9ULI2 386 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 DRG1Q9Y295 367 aaKnown RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 MRPS18BQ9Y676 258 aaKnown RBP16.32■□□□□ 0.2
DDB1-215ENST00000539712 RPS6KL1Q9Y6S9 549 aa16.32■□□□□ 0.2
DDB1-215ENST00000539712 ZNF891A8MT65 544 aaPredicted RBP16.31■□□□□ 0.2
DDB1-215ENST00000539712 BTN3A3O00478 584 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 OR1I1O60431 355 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 CCDC175P0C221 793 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 TPBGLP0DKB5 382 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 POLR2CP19387 275 aaPredicted RBP16.31■□□□□ 0.2
DDB1-215ENST00000539712 ADRA1DP25100 572 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 ACADLP28330 430 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 OAS2P29728 719 aaKnown RBP16.31■□□□□ 0.2
DDB1-215ENST00000539712 NSG1P42857 185 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 HSD11B2P80365 405 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 TUBB3Q13509 450 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 BOP1Q14137 746 aaKnown RBP16.31■□□□□ 0.2
DDB1-215ENST00000539712 SEMA3AQ14563 771 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 ITIH4Q14624 930 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 OOSP2Q86WS3 158 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 PPP1R3BQ86XI6 285 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 KMT5CQ86Y97 462 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 RASGRP3Q8IV61 690 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 SIDT2Q8NBJ9 832 aaKnown RBP16.31■□□□□ 0.2
DDB1-215ENST00000539712 FERD3LQ96RJ6 166 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 TFB2MQ9H5Q4 396 aaKnown RBP16.31■□□□□ 0.2
DDB1-215ENST00000539712 GEMIN8Q9NWZ8 242 aaKnown RBP16.31■□□□□ 0.2
DDB1-215ENST00000539712 POMT2Q9UKY4 750 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 HEBP2Q9Y5Z4 205 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 SPTBP11277 2137 aa16.31■□□□□ 0.2
DDB1-215ENST00000539712 HEATR9A2RTY3 570 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
DDB1-215ENST00000539712 GOT2P00505 430 aaKnown RBP16.3■□□□□ 0.2
DDB1-215ENST00000539712 FGGP02679 453 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 APRTP07741 180 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 GSTM1P09488 218 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 NDUFS1P28331 727 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 GSTM4Q03013 218 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 ATP1A1-AS1Q5TC04 95 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 BORAQ6PGQ7 559 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 NAPRTQ6XQN6 538 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 PPP1R21Q6ZMI0 780 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 OR52E1Q8NGJ3 308 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 LCN9Q8WX39 176 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 STARD8Q92502 1023 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 TFGQ92734 400 aaPredicted RBP16.3■□□□□ 0.2
DDB1-215ENST00000539712 KIAA1143Q96AT1 154 aaPredicted RBP16.3■□□□□ 0.2
DDB1-215ENST00000539712 SGSM3Q96HU1 749 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 FCRL4Q96PJ5 515 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms