RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 POLR3BQ9NW08 1133 aaPredicted RBP14.34□□□□□ -0.11
CACNB1-206ENST00000539338 FANCGO15287 622 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 HIST1H2ABP04908 130 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 RGS1Q08116 209 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 PRSS55Q6UWB4 352 aaPredicted RBP14.34□□□□□ -0.11
CACNB1-206ENST00000539338 HIST3H2AQ7L7L0 130 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 TMEM110Q86TL2 294 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 HIST1H2ACQ93077 130 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 PPP1R14AQ96A00 147 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 RERGQ96A58 199 aaPredicted RBP14.34□□□□□ -0.11
CACNB1-206ENST00000539338 HAPLN3Q96S86 360 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 CCDC162PA2VCL2 907 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 TNFRSF11BO00300 401 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 TFECO14948 347 aaPredicted RBP14.34□□□□□ -0.11
CACNB1-206ENST00000539338 C9orf64Q5T6V5 341 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 ERICH5Q6P6B1 374 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 GALNT18Q6P9A2 607 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 SIAH1Q8IUQ4 282 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 NRSN1Q8IZ57 195 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 ARL14EPQ8N8R7 260 aaPredicted RBP14.34□□□□□ -0.11
CACNB1-206ENST00000539338 HTRA1Q92743 480 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 FCRL5Q96RD9 977 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 WDR12Q9GZL7 423 aaKnown RBP14.34□□□□□ -0.11
CACNB1-206ENST00000539338 EBF2Q9HAK2 575 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 SEC14L3Q9UDX4 400 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 FAM159BA6NKW6 160 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 TMEM233B4DJY2 109 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 CBFA2T3O75081 653 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 EN2P19622 333 aaPredicted RBP14.34□□□□□ -0.11
CACNB1-206ENST00000539338 FAM174BQ3ZCQ3 159 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 PARGQ86W56 976 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 POF1BQ8WVV4 589 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 CXorf21Q9HAI6 301 aa14.34□□□□□ -0.11
CACNB1-206ENST00000539338 H0YGN5 161 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 IRAK2O43187 625 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 SIX3O95343 332 aaPredicted RBP14.33□□□□□ -0.12
CACNB1-206ENST00000539338 WRAP53Q9BUR4 548 aaKnown RBP14.33□□□□□ -0.12
CACNB1-206ENST00000539338 STRADBQ9C0K7 418 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 FAM83DQ9H4H8 585 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 NFS1Q9Y697 457 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 HAT1O14929 419 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 MTHFD1P11586 935 aaKnown RBP14.33□□□□□ -0.12
CACNB1-206ENST00000539338 ARHGAP1Q07960 439 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 ZDHHC20Q5W0Z9 365 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 CHST9Q7L1S5 443 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 CDK15Q96Q40 435 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 LOC110117498-PIK3R3F6TDL0 507 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 SERPINA1P01009 418 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 AKT2P31751 481 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 LRRC73Q5JTD7 316 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 AP2M1Q96CW1 435 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 C1GALT1C1Q96EU7 318 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 CNTN3Q9P232 1028 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 STX16-NPEPL1H3BU86 382 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 INPPL1O15357 1258 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 NOBOXO60393 691 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 TOP3BO95985 862 aaKnown RBP14.33□□□□□ -0.12
CACNB1-206ENST00000539338 ESR1P03372 595 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 ASMTP46597 345 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 SEPHS1P49903 392 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 GCNT6Q5T4J0 391 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 CMTR2Q8IYT2 770 aaKnown RBP14.33□□□□□ -0.12
CACNB1-206ENST00000539338 MAFAQ8NHW3 353 aaPredicted RBP14.33□□□□□ -0.12
CACNB1-206ENST00000539338 HPS1Q92902 700 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 NTAN1Q96AB6 310 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 EXOSC8Q96B26 276 aaKnown RBP14.33□□□□□ -0.12
CACNB1-206ENST00000539338 LRRC46Q96FV0 321 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 TEX264Q9Y6I9 313 aa14.33□□□□□ -0.12
CACNB1-206ENST00000539338 H3BNX3 289 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 OGNP20774 298 aaKnown RBP14.32□□□□□ -0.12
CACNB1-206ENST00000539338 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 TAF1AQ15573 450 aaPredicted RBP14.32□□□□□ -0.12
CACNB1-206ENST00000539338 EGFLAMQ63HQ2 1017 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 NAPRTQ6XQN6 538 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 FAM220AQ7Z4H9 259 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 CFAP206Q8IYR0 622 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 AIF1LQ9BQI0 150 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 UBAP1Q9NZ09 502 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 IFT80Q9P2H3 777 aaPredicted RBP14.32□□□□□ -0.12
CACNB1-206ENST00000539338 CPQQ9Y646 472 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 SQORQ9Y6N5 450 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 URADA6NGE7 173 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 IDH3BO43837 385 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 PTGER3P43115 390 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 SLC9A4Q6AI14 798 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 GPR65Q8IYL9 337 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 TIMMDC1Q9NPL8 285 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 RAPGEFL1Q9UHV5 662 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 PPM1HQ9ULR3 514 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 SLC38A8A6NNN8 435 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 SCELO95171 688 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 XRCC1P18887 633 aaPredicted RBP14.32□□□□□ -0.12
CACNB1-206ENST00000539338 WASP42768 502 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 SLC10A7Q0GE19 358 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 SULT1C3Q6IMI6 304 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 PAQR3Q6TCH7 311 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
CACNB1-206ENST00000539338 SUCOQ9UBS9 1254 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms