RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MGAT4DA6NG13 374 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 MASP2O00187 686 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 GAPDHSO14556 408 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 SERPINC1P01008 464 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 PVRP15151 417 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 ST6GAL1P15907 406 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 PTPN3P26045 913 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 TNNT3P45378 269 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 WNT3AP56704 352 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 ADCY2Q08462 1091 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 ITGA9Q13797 1035 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 PTPRCAPQ14761 206 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 TEX44Q53QW1 395 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 FIGNQ5HY92 759 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 DAAM2Q86T65 1068 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 RFX6Q8HWS3 928 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 LILRA3Q8N6C8 439 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 CLEC1AQ8NC01 280 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 LCN9Q8WX39 176 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 NRTNQ99748 197 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 MAK16Q9BXY0 300 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 PACSIN1Q9BY11 444 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 SRMSQ9H3Y6 488 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 DEF6Q9H4E7 631 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 C1GALT1Q9NS00 363 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 UVRAGQ9P2Y5 699 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 SERTAD3Q9UJW9 196 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 ACSL5Q9ULC5 683 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 SRPK3Q9UPE1 567 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 NTNG1Q9Y2I2 539 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 PKP3Q9Y446 797 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 COPG1Q9Y678 874 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 COLEC10Q9Y6Z7 277 aa13.6□□□□□ -0.23
SMARCA4-206ENST00000538456 C3orf70A6NLC5 250 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 E7EQ34 232 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 ZNF749O43361 778 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 PRAMEF1O95521 474 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 KRT1P04264 644 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 NFKB1P19838 968 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 AGXTP21549 392 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 GLRBP48167 497 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 MESDQ14696 234 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 NR1I3Q14994 352 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 LLGL1Q15334 1064 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 DCAF10Q5QP82 559 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 MLIPQ5VWP3 458 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 KDELC1Q6UW63 502 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 CLEC17AQ6ZS10 378 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 OR2L2Q8NH16 312 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 UBE2Q2Q8WVN8 375 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 TEKT5Q96M29 485 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 FAM153AQ9UHL3 310 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 OTOGQ6ZRI0 2925 aa13.59□□□□□ -0.23
SMARCA4-206ENST00000538456 ZGRF1Q86YA3 2104 aa13.58□□□□□ -0.23
SMARCA4-206ENST00000538456 PCM1Q15154 2024 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 APCP25054 2843 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 LOC285095A0A1B0GVY8 99 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 A0A1W2PQJ5 194 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 ARHGAP10A1A4S6 786 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 BTN3A1O00481 513 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 PEX12O00623 359 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 MAP3K7O43318 606 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 KLF7O75840 302 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 NDUFS1P28331 727 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 PRDX3P30048 256 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 CD68P34810 354 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 FOLR3P41439 243 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 FOXL2P58012 376 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 MYBPC3Q14896 1274 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 SLC9A5Q14940 896 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 C1orf189Q5VU69 101 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 SPOCD1Q6ZMY3 1216 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 CDHR3Q6ZTQ4 885 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 CUZD1Q86UP6 607 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 CFAP206Q8IYR0 622 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 ACVR1CQ8NER5 493 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 IPMKQ8NFU5 416 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 ZNF398Q8TD17 642 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 DTX3LQ8TDB6 740 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 RNF25Q96BH1 459 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 FER1L6-AS2Q96M78 137 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 DPH2Q9BQC3 489 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 BPIFA3Q9BQP9 254 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 DHRS4Q9BTZ2 278 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 ZNF552Q9H707 407 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 ZBTB20Q9HC78 741 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 SYTL2Q9HCH5 934 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 SMOXQ9NWM0 555 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 HACD3Q9P035 362 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 SAE1Q9UBE0 346 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms