RNA–Protein interactions for RNA: ENST00000536915.5

CYB561A3-208, Transcript of cytochrome b561 family member A3, human

APPRIS P1 TSL 2 BASIC

Gene CYB561A3, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561A3-208	ENST00000536915	HADHA	P40939	763 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	MAGEA3	P43357	314 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	RPL21	P46778	160 aa	Known RBP	13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ZNF140	P52738	457 aa	Predicted RBP	13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	TERF1	P54274	439 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SESN2	P58004	480 aa	Predicted RBP	13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	UBE2I	P63279	158 aa	Known RBP	13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	CYP4F2	P78329	520 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	MRPS25	P82663	173 aa	Known RBP	13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	CDC20	Q12834	499 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ITGA9	Q13797	1035 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	IL11RA	Q14626	422 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	PTPRCAP	Q14761	206 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	WASH2P	Q6VEQ5	465 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	NLRP9	Q7RTR0	991 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ADGRG6	Q86SQ4	1221 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	TRAPPC5	Q8IUR0	188 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	BBOF1	Q8ND07	529 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SEC14L1	Q92503	715 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	STAMBPL1	Q96FJ0	436 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	C9orf72	Q96LT7	481 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SERPINB12	Q96P63	405 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	LRRC1	Q9BTT6	524 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ULBP3	Q9BZM4	244 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	WASH6P	Q9NQA3	447 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	PRDM8	Q9NQV8	689 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	NLE1	Q9NVX2	485 aa	Predicted RBP	13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	WHRN	Q9P202	907 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ANAPC2	Q9UJX6	822 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	KCND3	Q9UK17	655 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	DNAJC16	Q9Y2G8	782 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SNX24	Q9Y343	169 aa		13.16	□□□□□ -0.3
CYB561A3-208	ENST00000536915	MAGEB16	A2A368	324 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SDR42E2	A6NKP2	422 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915		H7C0S8	307 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	GAPDHS	O14556	408 aa	Predicted RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	TERT	O14746	1132 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	AVIL	O75366	819 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	EML2	O95834	649 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	C9	P02748	559 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	CCNYL3	P0C7X3	344 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ITGB6	P18564	788 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	MGAT1	P26572	445 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SPAM1	P38567	509 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	CAPZB	P47756	277 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	XIAP	P98170	497 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ACVR1	Q04771	509 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SKIDA1	Q1XH10	827 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	PLA2G4E	Q3MJ16	856 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	GLE1	Q53GS7	698 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	LDLRAP1	Q5SW96	308 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	TSTD2	Q5T7W7	516 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	AGAP9	Q5VTM2	703 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	RASGRP3	Q8IV61	690 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	NOA1	Q8NC60	698 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	OR13C4	Q8NGS5	318 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	APOBEC4	Q8WW27	367 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	PMEPA1	Q969W9	287 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	CDKN2AIPNL	Q96HQ2	116 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ZNF514	Q96K75	400 aa	Predicted RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	SIGLEC10	Q96LC7	697 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	CTRC	Q99895	268 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	KIFC1	Q9BW19	673 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	CARD6	Q9BX69	1037 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	TBC1D10A	Q9BXI6	508 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	TRIM31	Q9BZY9	425 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	RAB17	Q9H0T7	212 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ZNF768	Q9H5H4	540 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	MRM3	Q9HC36	420 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ANAPC5	Q9UJX4	755 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	UTP11	Q9Y3A2	253 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	TCAF1	Q9Y4C2	921 aa		13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	ASH1L	Q9NR48	2969 aa	Known RBP	13.15	□□□□□ -0.3
CYB561A3-208	ENST00000536915	GLYATL1P3	A0A0U1RQE8	302 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	AGAP14	A8MT82	685 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	GOLGA8M	H3BSY2	632 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	WT1	P19544	449 aa	Predicted RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	ARSD	P51689	593 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	ITGA8	P53708	1063 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	CHRNA6	Q15825	494 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	SEPT7	Q16181	437 aa	Known RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	CCDC38	Q502W7	563 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	C8orf74	Q6P047	294 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	ABRAXAS1	Q6UWZ7	409 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	PRSS42	Q7Z5A4	293 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	BPHL	Q86WA6	291 aa	Predicted RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	BEND7	Q8N7W2	519 aa	Predicted RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	PPHLN1	Q8NEY8	458 aa	Known RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	ZNF398	Q8TD17	642 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	STARD8	Q92502	1023 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	DNAJC1	Q96KC8	554 aa	Known RBP	13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	ZNF778	Q96MU6	729 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	TGM7	Q96PF1	710 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	PDE7B	Q9NP56	450 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	CHRAC1	Q9NRG0	131 aa		13.14	□□□□□ -0.31
CYB561A3-208	ENST00000536915	FKBPL	Q9UIM3	349 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms