RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MARCH4Q9P2E8 410 aaPredicted RBP17.59■□□□□ 0.41
CCDC61-201ENST00000536603 ACSL5Q9ULC5 683 aa17.59■□□□□ 0.41
CCDC61-201ENST00000536603 COL6A6A6NMZ7 2263 aa17.59■□□□□ 0.41
CCDC61-201ENST00000536603 PRAMEF33A0A0G2JMD5 474 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 C17orf113A0A1B0GUU1 675 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 MAGEB16A2A368 324 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 GOLGA8KD6RF30 607 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 GOLGA8TH3BQL2 631 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 AGRPO00253 132 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 CPNE6O95741 557 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 PPARGP37231 505 aaPredicted RBP17.58■□□□□ 0.4
CCDC61-201ENST00000536603 MAGEA3P43357 314 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 INHBCP55103 352 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 DHX34Q14147 1143 aaKnown RBP17.58■□□□□ 0.4
CCDC61-201ENST00000536603 XKR5Q6UX68 686 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 PACS1Q6VY07 963 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 TMPRSS9Q7Z410 1059 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 B3GNT8Q7Z7M8 397 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 CXorf40BQ96DE9 158 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 AHCYL2Q96HN2 611 aaKnown RBP17.58■□□□□ 0.4
CCDC61-201ENST00000536603 TRIM56Q9BRZ2 755 aaKnown RBP17.58■□□□□ 0.4
CCDC61-201ENST00000536603 LRRC1Q9BTT6 524 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 WWP1Q9H0M0 922 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 VPS37BQ9H9H4 285 aa17.58■□□□□ 0.4
CCDC61-201ENST00000536603 FAM237BA0A1B0GVD1 139 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 HGFP14210 728 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 ARNTP27540 789 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 GPLD1P80108 840 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 RPE65Q16518 533 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 MAP9Q49MG5 647 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 AARS2Q5JTZ9 985 aaKnown RBP17.57■□□□□ 0.4
CCDC61-201ENST00000536603 ARMC3Q5W041 872 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 HOOK3Q86VS8 718 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 AGGF1Q8N302 714 aaeCLIP17.57■□□□□ 0.4
CCDC61-201ENST00000536603 OTUD6BQ8N6M0 293 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 OR10G6Q8NH81 332 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 HM13Q8TCT9 377 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 SIGLEC10Q96LC7 697 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 TMEM74Q96NL1 305 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 INSM2Q96T92 566 aaPredicted RBP17.57■□□□□ 0.4
CCDC61-201ENST00000536603 NUDT22Q9BRQ3 303 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 TBC1D10AQ9BXI6 508 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 TRIM31Q9BZY9 425 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 SLC40A1Q9NP59 571 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 POT1Q9NUX5 634 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 PISDQ9UG56 409 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 PCDHGA7Q9Y5G6 932 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 MAD1L1Q9Y6D9 718 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 RPS6KL1Q9Y6S9 549 aa17.57■□□□□ 0.4
CCDC61-201ENST00000536603 QSOX1O00391 747 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 OR56A5P0C7T3 313 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 PAMP19021 973 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 MAPK9P45984 424 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 ARCN1P48444 511 aaKnown RBP17.56■□□□□ 0.4
CCDC61-201ENST00000536603 TTPAP49638 278 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 SLC7A5Q01650 507 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 SQSTM1Q13501 440 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 TGIF1Q15583 401 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 ANKRD20A4Q4UJ75 823 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 KIAA0930Q6ICG6 404 aaPredicted RBP17.56■□□□□ 0.4
CCDC61-201ENST00000536603 ZNF574Q6ZN55 896 aaPredicted RBP17.56■□□□□ 0.4
CCDC61-201ENST00000536603 TMEM26Q6ZUK4 368 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 SPDYE1Q8NFV5 336 aaPredicted RBP17.56■□□□□ 0.4
CCDC61-201ENST00000536603 ZNF669Q96BR6 464 aaPredicted RBP17.56■□□□□ 0.4
CCDC61-201ENST00000536603 TRIM4Q9C037 500 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 ZMYND15Q9H091 742 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 SEMA6CQ9H3T2 930 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 COG4Q9H9E3 785 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 IMP3Q9NV31 184 aaKnown RBP17.56■□□□□ 0.4
CCDC61-201ENST00000536603 CFAP20Q9Y6A4 193 aaKnown RBP17.56■□□□□ 0.4
CCDC61-201ENST00000536603 PIKFYVEQ9Y2I7 2098 aa17.56■□□□□ 0.4
CCDC61-201ENST00000536603 EFCAB8A8MWE9 144 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 BHMG1C9JSJ3 638 aaPredicted RBP17.55■□□□□ 0.4
CCDC61-201ENST00000536603 EFSO43281 561 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 DUX1O43812 170 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 NDUFS3O75489 264 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 FTH1P02794 183 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 SLC35G4P0C7Q5 338 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 MPSTP25325 297 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 CCKBRP32239 447 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 EPHA4P54764 986 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 ZFP36L1Q07352 338 aaKnown RBP17.55■□□□□ 0.4
CCDC61-201ENST00000536603 MORF4L2Q15014 288 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 TRADDQ15628 312 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 CLPPQ16740 277 aaPredicted RBP17.55■□□□□ 0.4
CCDC61-201ENST00000536603 ZNF658BQ4V348 819 aaPredicted RBP17.55■□□□□ 0.4
CCDC61-201ENST00000536603 PHF19Q5T6S3 580 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 SDCCAG8Q86SQ7 713 aaPredicted RBP17.55■□□□□ 0.4
CCDC61-201ENST00000536603 TMEM135Q86UB9 458 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 SLITRK4Q8IW52 837 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 EXD3Q8N9H8 876 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 ZSCAN1Q8NBB4 408 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 NCSTNQ92542 709 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 EXTL1Q92935 676 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 C12orf66Q96MD2 445 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 UCK1Q9HA47 277 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 IL1RAPL1Q9NZN1 696 aa17.55■□□□□ 0.4
CCDC61-201ENST00000536603 DMGDHQ9UI17 866 aaKnown RBP17.55■□□□□ 0.4
CCDC61-201ENST00000536603 FAM187AA6NFU0 413 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 LILRA5A6NI73 299 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms