RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	DIDO1	Q9BTC0	2240 aa	Known RBP	4.58	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TMEM131	Q92545	1883 aa		4.58	□□□□□ -1.68
ECHDC1-223	ENST00000534442	WDR19	Q8NEZ3	1342 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TEX13C	A0A0J9YWL9	993 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	C17orf113	A0A1B0GUU1	675 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TARSL2	A2RTX5	802 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PABPN1L	A6NDY0	278 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ANTXRL	A6NF34	631 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MATN3	O15232	486 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FIBP	O43427	364 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	AHCYL1	O43865	530 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HBP1	O60381	514 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CS	O75390	466 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ADA	P00813	363 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ICAM1	P05362	532 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FCGR2A	P12318	317 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ST6GAL1	P15907	406 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RPS6KB1	P23443	525 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MCM7	P33993	719 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IL15	P40933	162 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RFX5	P48382	616 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CLK3	P49761	638 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EFNA5	P52803	228 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TIMM10	P62072	90 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MAMLD1	Q13495	774 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RPE65	Q16518	533 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	VWA5B1	Q5TIE3	1220 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RBM44	Q6ZP01	1051 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KLB	Q86Z14	1044 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RNF168	Q8IYW5	571 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZNF398	Q8TD17	642 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HSPH1	Q92598	858 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ERP27	Q96DN0	273 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KLHL15	Q96M94	604 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LRRC3B	Q96PB8	259 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FCRL5	Q96RD9	977 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SERINC2	Q96SA4	455 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KLK15	Q9H2R5	256 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MUC13	Q9H3R2	512 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SLITRK6	Q9H5Y7	841 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	DIAPH3	Q9NSV4	1193 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SEPT11	Q9NVA2	429 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MARCH5	Q9NX47	278 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	NSMCE4A	Q9NXX6	385 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IL1RAPL1	Q9NZN1	696 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	POLG2	Q9UHN1	485 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PACSIN3	Q9UKS6	424 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MMP17	Q9ULZ9	603 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ICK	Q9UPZ9	632 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TP53TG5	Q9Y2B4	290 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CLDN16	Q9Y5I7	305 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TENM3	Q9P273	2699 aa		4.57	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HIVEP2	P31629	2446 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	NFASC	O94856	1347 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442		A0A0A0MQY5	61 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	OR6C68	A6NDL8	312 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CXorf65	A6NEN9	183 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TMEM191C	A6NGB0	347 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EFCAB7	A8K855	629 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IFNL4	K9M1U5	179 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TACC1	O75410	805 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	DDHD2	O94830	711 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LY6G6D	O95868	133 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TUBB4A	P04350	444 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CHRM5	P08912	532 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GJA1	P17302	382 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PTPN2	P17706	415 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MARK3	P27448	753 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	BSG	P35613	385 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RAD52	P43351	418 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PPP2R2B	Q00005	443 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ABHD18	Q0P651	414 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MTA1	Q13330	715 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KIF19	Q2TAC6	998 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TWISTNB	Q3B726	338 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MANEA	Q5SRI9	462 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	C10orf76	Q5T2E6	689 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FAM160B2	Q86V87	743 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442		Q8N1X5	172 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CPXM2	Q8N436	756 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CHURC1	Q8WUH1	139 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KAT2A	Q92830	837 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SARAF	Q96BY9	339 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KLHL29	Q96CT2	875 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SAAL1	Q96ER3	474 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	C18orf12	Q96KH6	178 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TIGD1	Q96MW7	591 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MTMR9	Q96QG7	549 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FOXC2	Q99958	501 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	DUSP26	Q9BV47	211 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CXorf56	Q9H5V9	222 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EIF2B3	Q9NR50	452 aa	Known RBP	4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HAUS2	Q9NVX0	235 aa		4.56	□□□□□ -1.68
ECHDC1-223	ENST00000534442	VPS28	Q9UK41	221 aa		4.56	□□□□□ -1.68

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