RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ZNF470Q6ECI4 717 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 TMEM71Q6P5X7 295 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 TMEM220Q6QAJ8 160 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 C19orf48Q6RUI8 117 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 CERS6Q6ZMG9 384 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 UNC5AQ6ZN44 842 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 USP53Q70EK8 1073 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 AMZ2Q86W34 360 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 KCNMB4Q86W47 210 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 RBM12BQ8IXT5 1001 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 RASGEF1AQ8N9B8 481 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 OR10G6Q8NH81 332 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 CALML6Q8TD86 181 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 NAT14Q8WUY8 206 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 UBXN4Q92575 508 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 LINC00615Q96LM1 132 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 NUDT22Q9BRQ3 303 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 FAM167BQ9BTA0 163 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 TSPYL1Q9H0U9 437 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 SEMA6CQ9H3T2 930 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 IARS2Q9NSE4 1012 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZDHHC18Q9NUE0 388 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 AKAP7Q9P0M2 348 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 CPNE7Q9UBL6 633 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 NFU1Q9UMS0 254 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 LOXL2Q9Y4K0 774 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 SCN8AQ9UQD0 1980 aa12.69□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZFHX4Q86UP3 3567 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 UBA6A0AVT1 1052 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 PMS2P1A4D2B8 440 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 F8W8V4 182 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 DUX1O43812 170 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 SNX2O60749 519 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 JMJD7P0C870 316 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 ERVK-10P10266 1014 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 THRAP10827 490 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 ATP1B2P14415 290 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 HOXB3P14651 431 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 BRAFP15056 766 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 ARNTP27540 789 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 SLC19A1P41440 591 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 MAGEA4P43358 317 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 CTSCP53634 463 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 UCNP55089 124 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 TLE3Q04726 772 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 ITIH4Q14624 930 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 HSP90AA5PQ58FG0 334 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 SPACA3Q8IXA5 215 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 SGF29Q96ES7 293 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 AHCYL2Q96HN2 611 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 SGSM3Q96HU1 749 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 C9orf72Q96LT7 481 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 OSGEPL1Q9H4B0 414 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 VPS37BQ9H9H4 285 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 POT1Q9NUX5 634 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 SCHIP1Q9P0W5 487 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZNF624Q9P2J8 865 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 V9GYY5 206 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 CELSR3Q9NYQ7 3312 aa12.68□□□□□ -0.38
TRAPPC4-212ENST00000533058 MGAT4DA6NG13 374 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 BHMG1C9JSJ3 638 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 OR1I1O60431 355 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 POP7O75817 140 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 VIPP01282 170 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 ITPKBP27987 946 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 CSF2RBP32927 897 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 NSG1P42857 185 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 SEMA3AQ14563 771 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 C16orf72Q14CZ0 275 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 BCL7AQ4VC05 210 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 PHF19Q5T6S3 580 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 RNF187Q5TA31 235 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 NKAIN2Q5VXU1 208 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 METRNLQ641Q3 311 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 STEAP4Q687X5 459 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 PTRHD1Q6GMV3 140 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 FOXR1Q6PIV2 292 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 TMEM26Q6ZUK4 368 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 PDZD3Q86UT5 571 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 UNC5BQ8IZJ1 945 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 BEND7Q8N7W2 519 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 AGBL5Q8NDL9 886 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 GSDMBQ8TAX9 411 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 KCNE4Q8WWG9 221 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 CERS2Q96G23 380 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 WDR83Q9BRX9 315 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 PHACTR1Q9C0D0 580 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 PRORYQ9H606 182 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 SLC40A1Q9NP59 571 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 DNAJC16Q9Y2G8 782 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 PCDHGA3Q9Y5H0 932 aa12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZFC3H1O60293 1989 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZFYVE26Q68DK2 2539 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms