RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PGLSO95336 258 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 CA5AP35218 305 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 CTSOP43234 321 aaPredicted RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 IL2P60568 153 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 GRB7Q14451 532 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 CMTM8Q8IZV2 173 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 ANKFN1Q8N957 763 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 TUBGCP3Q96CW5 907 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 ALPK1Q96QP1 1244 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 ZNF347Q96SE7 839 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 SEMA6AQ9H2E6 1030 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 CD274Q9NZQ7 290 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 ZNF839A8K0R7 811 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 EIF3FO00303 357 aaPredicted RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 SNX2O60749 519 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 CLDN7O95471 211 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 BCL10O95999 233 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 PRDX3P30048 256 aaKnown RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 GALNT1Q10472 559 aaPredicted RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 RBBP7Q16576 425 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 UGT3A2Q3SY77 523 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 SMUG1Q53HV7 270 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 ANKS6Q68DC2 871 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 ZBTB49Q6ZSB9 765 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 TMEM26Q6ZUK4 368 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 CHSY3Q70JA7 882 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 CADM3Q8N126 398 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 NKAPQ8N5F7 415 aaKnown RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 ZNF784Q8NCA9 323 aaPredicted RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 CD200R1Q8TD46 325 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 PIH1D2Q8WWB5 315 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 LRTOMTQ8WZ04 291 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 SLC29A1Q99808 456 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 BOCQ9BWV1 1114 aa11.38□□□□□ -0.59
USP35-207ENST00000530546 KIAA0100Q14667 2235 aaKnown RBP11.38□□□□□ -0.59
USP35-207ENST00000530546 PLOD2O00469 737 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 FZD6O60353 706 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 PRAMEF1O95521 474 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 OLFM2O95897 454 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ALDOCP09972 364 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 MAP4P27816 1152 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 SLC7A1P30825 629 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 STX1BP61266 288 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 PSME3P61289 254 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 TRIM25Q14258 630 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 PTK2BQ14289 1009 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 MTX3Q5HYI7 312 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 REP15Q6BDI9 236 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 PTRHD1Q6GMV3 140 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 UGT3A1Q6NUS8 523 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 GALNT18Q6P9A2 607 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 LARP4Q71RC2 724 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP35-207ENST00000530546 GPSM1Q86YR5 675 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 CLDN19Q8N6F1 224 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 PNPT1Q8TCS8 783 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 HPS1Q92902 700 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ABCG8Q9H221 673 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ASB8Q9H765 288 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 IL1RL2Q9HB29 575 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 VPS9D1Q9Y2B5 631 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ASB1Q9Y576 335 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ANAPC1Q9H1A4 1944 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 TRAV19A0A0A6YYK7 116 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 LEFTY2O00292 366 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 LATS1O95835 1130 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 TSPAN12O95859 305 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 HK3P52790 923 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 AP1S1P61966 158 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 CACNG1Q06432 222 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 TRAP1Q12931 704 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 RALGDSQ12967 914 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ZNF846Q147U1 533 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 C18orf21Q32NC0 220 aaPredicted RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 SERPINA9Q86WD7 417 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 KREMEN2Q8NCW0 462 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 CIB1Q99828 191 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 SLC39A3Q9BRY0 314 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 SLC46A2Q9BY10 475 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ZBP1Q9H171 429 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 TUBB1Q9H4B7 451 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ZFYVE1Q9HBF4 777 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP35-207ENST00000530546 ABCB8Q9NUT2 735 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ANKMY1Q9P2S6 941 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 EIF2B4Q9UI10 523 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 INTS6Q9UL03 887 aaKnown RBP11.37□□□□□ -0.59
USP35-207ENST00000530546 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 SNX13Q9Y5W8 968 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 ANKRD36A6QL64 1941 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 SYCE1LA8MT33 242 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 E7ENX8 843 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 GFRA2O00451 464 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 NR5A2O00482 541 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 LILRB3O75022 631 aa11.37□□□□□ -0.59
USP35-207ENST00000530546 TRIM16O95361 564 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms