RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 TMPRSS11FQ6ZWK6 438 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 NUP54Q7Z3B4 507 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 RD3Q7Z3Z2 195 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 ZNF619Q8N2I2 560 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 ZNF611Q8N823 705 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 NEXN-AS1Q8NBZ9 246 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 PPP4R1Q8TF05 950 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 DDB2Q92466 427 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 MOB3AQ96BX8 217 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 BSCL2Q96G97 398 aaPredicted RBP6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 QRFPRQ96P65 431 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 GTPBP2Q9BX10 602 aaKnown RBP6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 SLA2Q9H6Q3 261 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 MINDY3Q9H8M7 445 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 IARS2Q9NSE4 1012 aaKnown RBP6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 AKAP7Q9P0M2 348 aaPredicted RBP6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 PA2G4Q9UQ80 394 aaKnown RBP6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 HS3ST3B1Q9Y662 390 aa6.19□□□□□ -1.42
CAPRIN1-208ENST00000530008 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 YDJCA8MPS7 323 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 SPRY3O43610 288 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 ACSL3O95573 720 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 HMOX1P09601 288 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 UBASH3AP57075 661 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 YBEYP58557 167 aaPredicted RBP6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 TRIP6Q15654 476 aaKnown RBP6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 KBTBD12Q3ZCT8 623 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 TCTE1Q5JU00 501 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 FNBP1LQ5T0N5 605 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 NHLRC1Q6VVB1 395 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 Q75L30 129 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 MAP7D3Q8IWC1 876 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 ANKRD13CQ8N6S4 541 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 C16orf52Q8NHV5 167 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 MAGEC3Q8TD91 643 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 SMPDL3BQ92485 455 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 RAD54LQ92698 747 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 TBC1D31Q96DN5 1066 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 HNRNPABQ99729 332 aaKnown RBP6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 LMF2Q9BU23 707 aaKnown RBP6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 ZNF350Q9GZX5 532 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 THAP9Q9H5L6 903 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 LMAN1LQ9HAT1 526 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 DNAJC17Q9NVM6 304 aaKnown RBP6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 NPAP1Q9NZP6 1156 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 ING1Q9UK53 422 aaPredicted RBP6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.18□□□□□ -1.423e-13■□□□□ 10.2
CAPRIN1-208ENST00000530008 PTPRCP08575 1304 aa6.18□□□□□ -1.42
CAPRIN1-208ENST00000530008 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 RPS10-NUDT3A0A1W2PQS6 291 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 PGRMC2O15173 223 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 RGS14O43566 566 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 SELENOFO60613 162 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 P4HA1P13674 534 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 ITIH1P19827 911 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 LHX1P48742 406 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 GMPSP49915 693 aaPredicted RBP6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 KHKP50053 298 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 MAPK12P53778 367 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 TEFQ10587 303 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 RBMS2Q15434 407 aaKnown RBP6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 LBHQ53QV2 105 aaPredicted RBP6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 MFSD12Q6NUT3 480 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 SHC4Q6S5L8 630 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 ENPP7Q6UWV6 458 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 KCTD9Q7L273 389 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 C4orf19Q8IY42 314 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 ZNF34Q8IZ26 560 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 CLYBLQ8N0X4 340 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 OR52I2Q8NH67 350 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 SLC25A28Q96A46 364 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 MTERF3Q96E29 417 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 SPATA33Q96N06 139 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 PCDH9Q9HC56 1237 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 KLHL9Q9P2J3 617 aa6.17□□□□□ -1.42
CAPRIN1-208ENST00000530008 SMIM30A4D0T7 59 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 FAM90A10PA6NDY2 464 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 NEMP2A6NFY4 417 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 DVL1O14640 695 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 RBMXL2O75526 392 aaKnown RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 NUDT3O95989 172 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 CSN3P07498 182 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 INHBAP08476 426 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 UROSP10746 265 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 TNFRSF1BP20333 461 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 KELP23276 732 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 C21orf33P30042 268 aaPredicted RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 ACVRL1P37023 503 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 AMTP48728 403 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 ADARP55265 1226 aaKnown RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 TPD52P55327 224 aaPredicted RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 COG7P83436 770 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 PDE1BQ01064 536 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 PNRC1Q12796 327 aaPredicted RBP6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 GPS2Q13227 327 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 TNK1Q13470 666 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 PPA1Q15181 289 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 TXNRD3NBQ6F5E7 133 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 DGLUCYQ7Z3D6 616 aa6.16□□□□□ -1.42
CAPRIN1-208ENST00000530008 TMPRSS11BQ86T26 416 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms