RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 COLEC10Q9Y6Z7 277 aa11.27□□□□□ -0.61
AMBRA1-207ENST00000529553 MASP2O00187 686 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 CLDN14O95500 239 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 UMODP07911 640 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 POLR2CP19387 275 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 HLA-DPA1P20036 260 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 CCNCP24863 283 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 NDUFS1P28331 727 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 PRDX3P30048 256 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 KIR3DL1P43629 444 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 CASP6P55212 293 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 RBPJQ06330 500 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 NIPAL4Q0D2K0 466 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 XRCC4Q13426 336 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 ISLR2Q6UXK2 745 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 CEP97Q8IW35 865 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 OR1N1Q8NGS0 311 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 DNAJB8Q8NHS0 232 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 VPS50Q96JG6 964 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 PPM1MQ96MI6 270 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 TSGA13Q96PP4 275 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 INSM2Q96T92 566 aaPredicted RBP11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 ENKD1Q9H0I2 346 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 SLC6A20Q9NP91 592 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 SEPT11Q9NVA2 429 aaKnown RBP11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 FBXL4Q9UKA2 621 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 TMPRSS11EQ9UL52 423 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 SEC16AO15027 2179 aa11.26□□□□□ -0.61
AMBRA1-207ENST00000529553 CCDC78A2IDD5 438 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 H3BMH7 237 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 FANCGO15287 622 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 PYGMP11217 842 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 ART1P52961 327 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 MFAP5Q13361 173 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 IFI16Q16666 785 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 NKAIN1Q4KMZ8 207 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 MYO7BQ6PIF6 2116 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 FAM83HQ6ZRV2 1179 aaPredicted RBP11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 ZGRF1Q86YA3 2104 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 CATSPER1Q8NEC5 780 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 OR4E2Q8NGC2 313 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 TAAR6Q96RI8 345 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 TREX2Q9BQ50 279 aaPredicted RBP11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 ZCCHC2Q9C0B9 1178 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 CHRNA10Q9GZZ6 450 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 NLRC4Q9NPP4 1024 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 ABI3Q9P2A4 366 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 NEU2Q9Y3R4 380 aa11.25□□□□□ -0.61
AMBRA1-207ENST00000529553 FER1L5A0AVI2 2057 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 MDC1Q14676 2089 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 TRAV17A0A0B4J275 112 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 GSAPA4D1B5 854 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 C19orf84I3L1E1 186 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 DDX3YO15523 660 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 CNOT3O75175 753 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 UNC5CO95185 931 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 CRYABP02511 175 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 MMP2P08253 660 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 ST6GAL1P15907 406 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 EEF1GP26641 437 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 ADORA2A-AS1P86434 159 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 GALNT2Q10471 571 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 NFE2L1Q14494 772 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 ATP13A5Q4VNC0 1218 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 TCP11X2Q5H9J9 407 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 LDLRAP1Q5SW96 308 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 CDHR3Q6ZTQ4 885 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 GDAP1Q8TB36 358 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 CPLX3Q8WVH0 158 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 HAS2Q92819 552 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 C12orf66Q96MD2 445 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 GPR63Q9BZJ6 419 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 SRMSQ9H3Y6 488 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 WDR54Q9H977 334 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 SEC14L3Q9UDX4 400 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 SHOC2Q9UQ13 582 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 TTLL3Q9Y4R7 772 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 HEBP2Q9Y5Z4 205 aa11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 CFAP20Q9Y6A4 193 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-207ENST00000529553 MGAT4DA6NG13 374 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 SOCS6O14544 535 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 OR2B3O76000 313 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 ONECUT2O95948 504 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 ALBP02768 609 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 CCDC172P0C7W6 258 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 ESRRAP11474 423 aaPredicted RBP11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 DRD2P14416 443 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 IL1R2P27930 398 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 CD86P42081 329 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 LMAN1P49257 510 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 Q0VFX4 171 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 BECN1Q14457 450 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 KRT33BQ14525 404 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 CCDC122Q5T0U0 273 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 ZDHHC20Q5W0Z9 365 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 TLDC1Q6P9B6 456 aa11.23□□□□□ -0.61
AMBRA1-207ENST00000529553 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms