RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PTGIRP43119 386 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 ATP5OP48047 213 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 EIF3EP60228 445 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 PDE1BQ01064 536 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 OTUD4Q01804 1114 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 CDK18Q07002 472 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 LAMB3Q13751 1172 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 TUBB2AQ13885 445 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 PLCL1Q15111 1095 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 LONRF2Q1L5Z9 754 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 DNTTIP2Q5QJE6 756 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 PAPD7Q5XG87 772 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 KLHL35Q6PF15 583 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 NPNTQ6UXI9 565 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 AMZ2Q86W34 360 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 TMEM126BQ8IUX1 230 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 RASGEF1CQ8N431 466 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 TTC30BQ8N4P2 665 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 SPATA22Q8NHS9 363 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 ACTL9Q8TC94 416 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 ACTRT1Q8TDG2 376 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 MR1Q95460 341 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 TTC25Q96NG3 672 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 PPP1R2P1Q96PQ5 205 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 QKIQ96PU8 341 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 TUBB2BQ9BVA1 445 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 ING2Q9H160 280 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC25A51Q9H1U9 297 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 IMP3Q9NV31 184 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 FARSAQ9Y285 508 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 MAP4K5Q9Y4K4 846 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 UBA6A0AVT1 1052 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 A1L4Q6 167 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 TLCD2A6NGC4 264 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 GPR39O43194 453 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 KCNJ13O60928 360 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CPNE3O75131 537 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 PMPCBO75439 489 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 SCRG1O75711 98 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 POP7O75817 140 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 NDST3O95803 873 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 RBP3P10745 1247 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 PECAM1P16284 738 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CXCR5P32302 372 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 TUBB4BP68371 445 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 HSD11B2P80365 405 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 ADCY2Q08462 1091 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 DMPKQ09013 629 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 GPS2Q13227 327 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 NFE2L1Q14494 772 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 PRKD1Q15139 912 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 INPP5JQ15735 1006 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 GPR19Q15760 415 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CHRNA6Q15825 494 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC14A2Q15849 920 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 RPE65Q16518 533 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CCNG2Q16589 344 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 PRR30Q53SZ7 412 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CCDC70Q6NSX1 233 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 AADACL2Q6P093 401 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 DARS2Q6PI48 645 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 SYT10Q6XYQ8 523 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 FAM83HQ6ZRV2 1179 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 B4GALNT4Q76KP1 1039 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 ZC3H18Q86VM9 953 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 KMT5CQ86Y97 462 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 C17orf53Q8N3J3 647 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 D2HGDHQ8N465 521 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 RASGEF1AQ8N9B8 481 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC38A9Q8NBW4 561 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 BRSK1Q8TDC3 778 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 TADA1Q96BN2 335 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 LRRC45Q96CN5 670 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 ZNF501Q96CX3 271 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 C16orf45Q96MC5 204 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CD180Q99467 661 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CHST8Q9H2A9 424 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 HRASLS2Q9NWW9 162 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 UBP1Q9NZI7 540 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 LUZP4Q9P127 313 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 FEZ2Q9UHY8 353 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 TRHDEQ9UKU6 1024 aa9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 CFAP20Q9Y6A4 193 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-206ENST00000525303 TEP1Q99973 2627 aaKnown RBP9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 OR5K3A6NET4 321 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 OR2AG2A6NM03 316 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 TCP11X1B4DZS4 312 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 UGT1A9O60656 530 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 TMEM63AO94886 807 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 KLK3P07288 261 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 MTHFD1P11586 935 aaKnown RBP9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 UGT1A6P19224 532 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 LPOP22079 712 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 UGT1A1P22309 533 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 UGT1A4P22310 534 aa9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 PBLDP30039 288 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 STIP1P31948 543 aaKnown RBP9.33□□□□□ -0.92
TRAPPC4-206ENST00000525303 CA5AP35218 305 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms