RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 CAPN3P20807 821 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 RPIAP49247 311 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 GRIN2CQ14957 1233 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 ZNF284Q2VY69 593 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 FNDC3BQ53EP0 1204 aaKnown RBP25.37■■□□□ 1.65
COL13A1-214ENST00000522165 C6orf136Q5SQH8 315 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 IL27RAQ6UWB1 636 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 GET4Q7L5D6 327 aaPredicted RBP25.37■■□□□ 1.65
COL13A1-214ENST00000522165 DHDDSQ86SQ9 333 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 VRK3Q8IV63 474 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 PCYOX1LQ8NBM8 494 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 SLC12A9Q9BXP2 914 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 SPAG4Q9NPE6 437 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 GDE1Q9NZC3 331 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 BCAP29Q9UHQ4 241 aa25.37■■□□□ 1.65
COL13A1-214ENST00000522165 H3BNX3 289 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 C8GP07360 202 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ENO2P09104 434 aaPredicted RBP25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ELFN1P0C7U0 828 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 BOP1Q14137 746 aaKnown RBP25.36■■□□□ 1.65
COL13A1-214ENST00000522165 VPS26BQ4G0F5 336 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 BLOC1S3Q6QNY0 202 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 LAYNQ6UX15 382 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 UBE2R2Q712K3 238 aaPredicted RBP25.36■■□□□ 1.65
COL13A1-214ENST00000522165 GDPD5Q8WTR4 605 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ASB11Q8WXH4 323 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 LMAN2LQ9H0V9 348 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 TRPV4Q9HBA0 871 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 SLC52A3Q9NQ40 469 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 MRPL40Q9NQ50 206 aaKnown RBP25.36■■□□□ 1.65
COL13A1-214ENST00000522165 OBP2AQ9NY56 170 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ACOT8O14734 319 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 KPNA5O15131 536 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 MAP3K7O43318 606 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 BCAS2O75934 225 aaPredicted RBP25.36■■□□□ 1.65
COL13A1-214ENST00000522165 HLA-EP13747 358 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ATP6V1C1P21283 382 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 CDKL1Q00532 357 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 CREB5Q02930 508 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 HNRNPA1L2Q32P51 320 aaKnown RBP25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ATP6AP1LQ52LC2 224 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 C9orf64Q5T6V5 341 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 SFRP1Q8N474 314 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 BTN2A2Q8WVV5 523 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 PARVBQ9HBI1 364 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 HPS4Q9NQG7 708 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ARL15Q9NXU5 204 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 MAP10Q9P2G4 905 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 ITM2BQ9Y287 266 aa25.36■■□□□ 1.65
COL13A1-214ENST00000522165 C9JVG2 144 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 STK16O75716 305 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 FCARP24071 287 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 HMOX2P30519 316 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 METAP1P53582 386 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 EIF4HQ15056 248 aaKnown RBP25.35■■□□□ 1.65
COL13A1-214ENST00000522165 PDCD4Q53EL6 469 aaKnown RBP25.35■■□□□ 1.65
COL13A1-214ENST00000522165 TSPEARQ8WU66 669 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 VPS35Q96QK1 796 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 C1orf50Q9BV19 199 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 NTMT1Q9BV86 223 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 DZANK1Q9NVP4 752 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 TMEM181Q9P2C4 612 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 MUC22E2RYF6 1773 aaPredicted RBP25.35■■□□□ 1.65
COL13A1-214ENST00000522165 EDDM13A0A1B0GTR0 161 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 SYNCRIPO60506 623 aaKnown RBP25.35■■□□□ 1.65
COL13A1-214ENST00000522165 ACADSP16219 412 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 EPB42P16452 691 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 ABRAXAS2Q15018 415 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 ACOX1Q15067 660 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 PDGFRLQ15198 375 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 ZNF648Q5T619 568 aaPredicted RBP25.35■■□□□ 1.65
COL13A1-214ENST00000522165 NRSN1Q8IZ57 195 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 FNDC5Q8NAU1 212 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 FAM156AQ8NDB6 213 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 TMIEQ8NEW7 156 aa25.35■■□□□ 1.65
COL13A1-214ENST00000522165 SKA2Q8WVK7 121 aaPredicted RBP25.35■■□□□ 1.65
COL13A1-214ENST00000522165 SUCOQ9UBS9 1254 aaKnown RBP25.35■■□□□ 1.65
COL13A1-214ENST00000522165 PSMD11O00231 422 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 ANGPT2O15123 496 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 SPINT1O43278 529 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 GGT5P36269 586 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 COQ5Q5HYK3 327 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 LDLRAP1Q5SW96 308 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 TTC23LQ6PF05 361 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 ELMO1Q92556 727 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 SLC45A3Q96JT2 553 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 TEX37Q96LM6 180 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 TRIM54Q9BYV2 358 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 THG1LQ9NWX6 298 aaKnown RBP25.34■■□□□ 1.65
COL13A1-214ENST00000522165 CD300AQ9UGN4 299 aa25.34■■□□□ 1.65
COL13A1-214ENST00000522165 GFYI3L273 518 aa25.33■■□□□ 1.65
COL13A1-214ENST00000522165 FTH1P02794 183 aa25.33■■□□□ 1.65
COL13A1-214ENST00000522165 TCN1P20061 433 aaPredicted RBP25.33■■□□□ 1.65
COL13A1-214ENST00000522165 ITGB7P26010 798 aa25.33■■□□□ 1.65
COL13A1-214ENST00000522165 ZFP36L2P47974 494 aaKnown RBP25.33■■□□□ 1.65
COL13A1-214ENST00000522165 SP140Q13342 867 aa25.33■■□□□ 1.65
COL13A1-214ENST00000522165 NEK10Q6ZWH5 1172 aa25.33■■□□□ 1.65
COL13A1-214ENST00000522165 GPR149Q86SP6 731 aa25.33■■□□□ 1.65
COL13A1-214ENST00000522165 SFTPA1Q8IWL2 248 aa25.33■■□□□ 1.65
COL13A1-214ENST00000522165 KBTBD2Q8IY47 623 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms