RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 THEGQ9P2T0 379 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 MYOCOSA0A1B0GUC4 107 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 SMNDC1O75940 238 aaKnown RBP eCLIP11.16□□□□□ -0.626e-6■■■■□ 20
CLK4-206ENST00000520878 GPX3P22352 226 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 CA5AP35218 305 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 BMPR1AP36894 532 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 PREPP48147 710 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 SLC7A9P82251 487 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 GALNT1Q10472 559 aaPredicted RBP11.16□□□□□ -0.62
CLK4-206ENST00000520878 ADGRE1Q14246 886 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 GSTA3Q16772 222 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 FAM174BQ3ZCQ3 159 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 LYPLAL1Q5VWZ2 237 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 KANK2Q63ZY3 851 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 ALG1LQ6GMV1 187 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 CRTC3Q6UUV7 619 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 CYP20A1Q6UW02 462 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 GCNT7Q6ZNI0 430 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 GET4Q7L5D6 327 aaPredicted RBP11.16□□□□□ -0.62
CLK4-206ENST00000520878 MAELQ96JY0 434 aaKnown RBP11.16□□□□□ -0.62
CLK4-206ENST00000520878 HOPXQ9BPY8 73 aaPredicted RBP11.16□□□□□ -0.62
CLK4-206ENST00000520878 CENPKQ9BS16 269 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 HTATIP2Q9BUP3 242 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 ALG2Q9H553 416 aa11.16□□□□□ -0.62
CLK4-206ENST00000520878 CASP8AP2Q9UKL3 1982 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 K7EPI3 171 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 PDLIM1O00151 329 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 RNASEH1O60930 286 aaKnown RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 LATS1O95835 1130 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 FGF4P08620 206 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 RPS17P08708 135 aaKnown RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 EEF1B2P24534 225 aaKnown RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 FASP25445 335 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 GNPDA1P46926 289 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 CLCN7P51798 805 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 NAE1Q13564 534 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 TMEM259Q4ZIN3 620 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 RAET1GQ6H3X3 334 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 YAF2Q8IY57 180 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 RAVER1Q8IY67 606 aaKnown RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 CRIPAKQ8N1N5 446 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 FAM162AQ96A26 154 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 ZNF689Q96CS4 500 aaPredicted RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 TEX37Q96LM6 180 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 ZSWIM3Q96MP5 696 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 ACAT2Q9BWD1 397 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 LRTM1Q9HBL6 345 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 INTS7Q9NVH2 962 aaKnown RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 HSFX1Q9UBD0 423 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 SUFUQ9UMX1 484 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 PCDH8O95206 1070 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 INHBCP55103 352 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 LRP8Q14114 963 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 PTCHD3Q3KNS1 767 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLK4-206ENST00000520878 RFTN2Q52LD8 501 aaPredicted RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 XKR6Q5GH73 641 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 PAGE3Q5JUK9 113 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 SLC15A3Q8IY34 581 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 LIX1Q8N485 282 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 GPR156Q8NFN8 814 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 SH3KBP1Q96B97 665 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 SDCCAG3Q96C92 435 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 PPP3R2Q96LZ3 170 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 MTERF1Q99551 399 aaKnown RBP11.15□□□□□ -0.62
CLK4-206ENST00000520878 PCDH12Q9NPG4 1184 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 LIMD1Q9UGP4 676 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 OR51B4Q9Y5P0 310 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
CLK4-206ENST00000520878 CLDN9O95484 217 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 LBX1P52954 281 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 NFKB2Q00653 900 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 AAK1Q2M2I8 961 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 SLC5A9Q2M3M2 681 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 UGT3A2Q3SY77 523 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 SULT1C3Q6IMI6 304 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 PDSS2Q86YH6 399 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 CLEC4FQ8N1N0 589 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 PELI3Q8N2H9 469 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 OR2T34Q8NGX1 318 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 OR2T3Q8NH03 318 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ALG14Q96F25 216 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 OR52E6Q96RD3 313 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 EBPLQ9BY08 206 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 DEC1Q9P2X7 70 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 ARHGAP10A1A4S6 786 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 NME4O00746 187 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 SLC9A3R1O14745 358 aaPredicted RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 LHCGRP22888 699 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 GPR1P46091 355 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 RPL26P61254 145 aaKnown RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 PPP1R8Q12972 351 aaKnown RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 AASDHQ4L235 1098 aaPredicted RBP11.14□□□□□ -0.63
CLK4-206ENST00000520878 PRMT9Q6P2P2 845 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 TMEM220Q6QAJ8 160 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 RNF111Q6ZNA4 994 aa11.14□□□□□ -0.63
CLK4-206ENST00000520878 Q6ZNB5 142 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms