RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 KMOO15229 486 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 PRICKLE3O43900 615 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 VEGFDO43915 354 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 FBXO24O75426 580 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ZBTB11O95625 1053 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 CALB1P05937 261 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 CAPN1P07384 714 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 BRAFP15056 766 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ZNF7P17097 686 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ERCC2P18074 760 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 IDSP22304 550 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ARNTP27540 789 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 NOS3P29474 1203 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 OTX2P32243 289 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 CA5AP35218 305 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 RORAP35398 523 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 HALP42357 657 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 GATA4P43694 442 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 MTIF2P46199 727 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 NSFP46459 744 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ARCN1P48444 511 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SPINT3P49223 89 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ZNF135P52742 658 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SOX8P57073 446 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 PPP1CAP62136 330 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ADCY2Q08462 1091 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 PTP4A2Q12974 167 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SSPNQ14714 243 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 PLCL1Q15111 1095 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 GPR19Q15760 415 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SEPT7Q16181 437 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 EXOSC6Q5RKV6 272 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 MEI1Q5TIA1 1274 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 B3GNTL1Q67FW5 361 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 DPY19L2P1Q6NXN4 242 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 DNAJC24Q6P3W2 148 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 CRTC3Q6UUV7 619 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 FAM180AQ6UWF9 173 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 RPTNQ6XPR3 784 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 CERS6Q6ZMG9 384 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SYTL1Q8IYJ3 562 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 CARFQ8N187 725 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 PGBD5Q8N414 524 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 NPWQ8N729 165 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 PPP4R1Q8TF05 950 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ZNF501Q96CX3 271 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 CLIP3Q96DZ5 547 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 WDR24Q96S15 920 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SLX1AQ9BQ83 275 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 C17orf62Q9BQA9 187 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 TMPRSS13Q9BYE2 586 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 STK33Q9BYT3 514 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 OR2AG1Q9H205 316 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 VPS16Q9H269 839 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 FAM83DQ9H4H8 585 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 DHX35Q9H5Z1 703 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SYTL2Q9HCH5 934 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 TRIM39Q9HCM9 518 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 GPATCH2LQ9NWQ4 482 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 PKD2L2Q9NZM6 624 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 SLC23A2Q9UGH3 650 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 RWDD2AQ9UIY3 292 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 NOCTQ9UK39 431 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 AP4E1Q9UPM8 1137 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 DNAJC16Q9Y2G8 782 aa6.31□□□□□ -1.4
CTNNA1-217ENST00000519634 ZNF106Q9H2Y7 1883 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 PCNX1Q96RV3 2341 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CHD5Q8TDI0 1954 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 OR5K3A6NET4 321 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 BIN1O00499 593 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CHUKO15111 745 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 KCNN4O15554 427 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 JRKO75564 520 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 FAM155BO75949 473 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 SLC25A14O95258 325 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CLDN7O95471 211 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 PEX11BO96011 259 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 IGHA1P01876 353 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 PDHA1P08559 390 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CD63P08962 238 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 GSTP1P09211 210 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 UNGP13051 313 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 UCHL3P15374 230 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CHRNB2P17787 502 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 VCLP18206 1134 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CYP2A7P20853 494 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 AGXTP21549 392 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CA4P22748 312 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 RPL10P27635 214 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 MMP13P45452 471 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 HCAR3P49019 387 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 MAXP61244 160 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 RPL26P61254 145 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 FMO1Q01740 532 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 OTUD4Q01804 1114 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CDC16Q13042 620 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 ZNF169Q14929 603 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 MAN2A1Q16706 1144 aa6.3□□□□□ -1.4
CTNNA1-217ENST00000519634 CA9Q16790 459 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms