RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 ZNF749O43361 778 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 PYGMP11217 842 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 CDK11BP21127 795 aaKnown RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 PBLDP30039 288 aaPredicted RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 HMGCLP35914 325 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 AIMP2Q13155 320 aaKnown RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 ITGA9Q13797 1035 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 DPYSL3Q14195 570 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 GSE1Q14687 1217 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 PCSK7Q16549 785 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 LONRF2Q1L5Z9 754 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 DUS1LQ6P1R4 473 aaKnown RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 TMEM220Q6QAJ8 160 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 FAM180AQ6UWF9 173 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 SPOCD1Q6ZMY3 1216 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 NT5DC3Q86UY8 548 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 MAP7D3Q8IWC1 876 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 NXPE1Q8N323 547 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 RASGEF1AQ8N9B8 481 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 KCTD6Q8NC69 237 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 OR2Y1Q8NGV0 311 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 DNAJB14Q8TBM8 379 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 PTERQ96BW5 349 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 IMP4Q96G21 291 aaKnown RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 PPM1MQ96MI6 270 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 GBP5Q96PP8 586 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 INSM2Q96T92 566 aaPredicted RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 WWP1Q9H0M0 922 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 HAUS4Q9H6D7 363 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 ZBTB20Q9HC78 741 aaPredicted RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 BPIFA1Q9NP55 256 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 SUCOQ9UBS9 1254 aaKnown RBP11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 ITGB1BP2Q9UKP3 347 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 TMPRSS11EQ9UL52 423 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 HEBP2Q9Y5Z4 205 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 AP1M2Q9Y6Q5 423 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 CCDC168Q8NDH2 2452 aa11.35□□□□□ -0.59
TMEM55A-202ENST00000518359 CNTRLQ7Z7A1 2325 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 MGAT4DA6NG13 374 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 LRRC53A6NM62 1247 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 AGPSO00116 658 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 COX6B1P14854 86 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 AKT1P31749 480 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 LMAN1P49257 510 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 CTSCP53634 463 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 IFI35P80217 286 aaPredicted RBP11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 GBE1Q04446 702 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 PPIDQ08752 370 aaKnown RBP11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 ZNF169Q14929 603 aaPredicted RBP11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 PDK2Q15119 407 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 SLC14A2Q15849 920 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 PPP2R5EQ16537 467 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 HIF1AQ16665 826 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 AGAP7PQ5VUJ5 663 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 ZNF571Q7Z3V5 609 aaPredicted RBP11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 PARP9Q8IXQ6 854 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 DDHD1Q8NEL9 900 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 ACVR1CQ8NER5 493 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 OR4E2Q8NGC2 313 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 PROKR1Q8TCW9 393 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 LRRN4Q8WUT4 740 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 NACC2Q96BF6 587 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 CNDP1Q96KN2 507 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 AGAP4Q96P64 663 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 PITPNM3Q9BZ71 974 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 SRMSQ9H3Y6 488 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 TRABDQ9H4I3 376 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 EPS8L2Q9H6S3 715 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 OLAHQ9NV23 265 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 IFT80Q9P2H3 777 aaPredicted RBP11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 ANAPC7Q9UJX3 599 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
TMEM55A-202ENST00000518359 CCDC66A2RUB6 948 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 DDX3XO00571 662 aaKnown RBP eCLIP11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 NDST3O95803 873 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 ST6GAL1P15907 406 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 MSH3P20585 1137 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 PRDX3P30048 256 aaKnown RBP11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 GJC1P36383 396 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 SPAM1P38567 509 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 TNNT3P45378 269 aaPredicted RBP11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 ARSEP51690 589 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 DCDP81605 110 aaKnown RBP11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 KLHL30Q0D2K2 578 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 ZBTB17Q13105 803 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 TLR1Q15399 786 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 FNBP1LQ5T0N5 605 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 RHBDD2Q6NTF9 364 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 MTFR2Q6P444 385 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 PPP1R32Q7Z5V6 425 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 HOOK3Q86VS8 718 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 CNTD1Q8N815 330 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 BCORP1Q8N888 145 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 OR2L2Q8NH16 312 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 CPLX3Q8WVH0 158 aa11.33□□□□□ -0.6
TMEM55A-202ENST00000518359 LCN9Q8WX39 176 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms