RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 KCNK9Q9NPC2 374 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CHRAC1Q9NRG0 131 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 KLC4Q9NSK0 619 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 SYBUQ9NX95 663 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ZDHHC3Q9NYG2 299 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 SIRPGQ9P1W8 387 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 SLC23A2Q9UGH3 650 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 SOX13Q9UN79 622 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 WASF3Q9UPY6 502 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 TCAF1Q9Y4C2 921 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 PCYT1BQ9Y5K3 369 aaPredicted RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 IKBKGQ9Y6K9 419 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 TMEM131Q92545 1883 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 TRBV23OR9-2A0A075B6M9 112 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 CCDC78A2IDD5 438 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 CCDC162PA2VCL2 907 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 KLHL33A6NCF5 533 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 B4DGG1 531 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 ZW10O43264 779 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 NUDT21O43809 227 aaKnown RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 HYAL3O43820 417 aaPredicted RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 SNX3O60493 162 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 AP2A2O94973 939 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 MT-ND3P03897 115 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 ATP1B2P14415 290 aaPredicted RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 SLC2A4P14672 509 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 JUPP14923 745 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 GLB1P16278 677 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 VCLP18206 1134 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 IDSP22304 550 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 AKT1P31749 480 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 FOXN2P32314 431 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 PPARGP37231 505 aaPredicted RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 MAGEA12P43365 314 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 CDKN1CP49918 316 aaPredicted RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 CTSCP53634 463 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 SHC2P98077 582 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 BIRC2Q13490 618 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 DBN1Q16643 649 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 ANKRD20A4Q4UJ75 823 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 FASTKD1Q53R41 847 aaKnown RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 LYPLAL1Q5VWZ2 237 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 GUSBP11Q6P575 273 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 IYDQ6PHW0 289 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 CRTC3Q6UUV7 619 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 WASH2PQ6VEQ5 465 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 CERS6Q6ZMG9 384 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 MICALCLQ6ZW33 695 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 C11orf96Q7Z7L8 435 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 SERPINA9Q86WD7 417 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 TRAPPC5Q8IUR0 188 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 CNTN4Q8IWV2 1026 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 LRRC34Q8IZ02 419 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 NAGSQ8N159 534 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 KYQ8NBH2 561 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 OR13J1Q8NGT2 312 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 OR4L1Q8NH43 312 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 WDR48Q8TAF3 677 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 MAPK15Q8TD08 544 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 CDKL2Q92772 493 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCL28-204ENST00000514421 CERS2Q96G23 380 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 ZNF778Q96MU6 729 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 HS3ST6Q96QI5 342 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 SCNM1Q9BWG6 230 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 FAM107BQ9H098 131 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 NSRP1Q9H0G5 558 aaKnown RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 WASH6PQ9NQA3 447 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 LRIT1Q9P2V4 623 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 TBC1D29Q9UFV1 150 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 SLC2A6Q9UGQ3 507 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 ANGPTL2Q9UKU9 493 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 GRID1Q9ULK0 1009 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 KCNK6Q9Y257 313 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 MAD1L1Q9Y6D9 718 aa8.17□□□□□ -1.1
CCL28-204ENST00000514421 ARHGEF17Q96PE2 2063 aaPredicted RBP8.17□□□□□ -1.1
CCL28-204ENST00000514421 IGLV3-16A0A075B6K0 115 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 KIR2DS5A0A0G2JLQ3 304 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 A0A0G2JNG1 304 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 C17orf113A0A1B0GUU1 675 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 MGAT4DA6NG13 374 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 OR2AG2A6NM03 316 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 RHPN2P1A8MT19 583 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 TCP11X1B4DZS4 312 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 TRIM49D1C9J1S8 452 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 KIR2DS3K7RE56 304 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 KLF11O14901 512 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 GPR39O43194 453 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 SNX2O60749 519 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 TOP3BO95985 862 aaKnown RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 MT-CO3P00414 261 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 GOT2P00505 430 aaKnown RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 F3P13726 295 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 XRCC1P18887 633 aaPredicted RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 ACRV1P26436 265 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 CRHR1P34998 444 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 NSG1P42857 185 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 GPR3P46089 330 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms