RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 HTR1BP28222 390 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 EEF1DP29692 281 aaKnown RBP15.68■□□□□ 0.1
NUP54-214ENST00000514307 CD6P30203 668 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 MAT2AP31153 395 aaKnown RBP15.68■□□□□ 0.1
NUP54-214ENST00000514307 PIK3CGP48736 1102 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 AQP5P55064 265 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 ABRQ12979 859 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 IFT88Q13099 833 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 CES4AQ5XG92 561 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 ANO7Q6IWH7 933 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 CGB2Q6NT52 195 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 SBSNQ6UWP8 590 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 FRMD7Q6ZUT3 714 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 TRIM74Q86UV6 250 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 SLC22A15Q8IZD6 547 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 CLYBLQ8N0X4 340 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 PDPRQ8NCN5 879 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 OR56A4Q8NGH8 313 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 RFWD2Q8NHY2 731 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 NAT14Q8WUY8 206 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 FOXJ1Q92949 421 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 THOC1Q96FV9 657 aaKnown RBP15.68■□□□□ 0.1
NUP54-214ENST00000514307 RILPQ96NA2 401 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 TMEM237Q96Q45 408 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 HGH1Q9BTY7 390 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 DPEP2Q9H4A9 486 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 TBC1D17Q9HA65 648 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 ARL15Q9NXU5 204 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 UTP6Q9NYH9 597 aaKnown RBP15.68■□□□□ 0.1
NUP54-214ENST00000514307 MBD1Q9UIS9 605 aaPredicted RBP15.68■□□□□ 0.1
NUP54-214ENST00000514307 PTBP2Q9UKA9 531 aaKnown RBP15.68■□□□□ 0.1
NUP54-214ENST00000514307 ACSL5Q9ULC5 683 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 CDYLQ9Y232 598 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 ANGPTL3Q9Y5C1 460 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 XIRP2A4UGR9 3374 aa15.68■□□□□ 0.1
NUP54-214ENST00000514307 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
NUP54-214ENST00000514307 NCF1BA6NI72 391 aaPredicted RBP15.67■□□□□ 0.1
NUP54-214ENST00000514307 NCF1CA8MVU1 366 aaPredicted RBP15.67■□□□□ 0.1
NUP54-214ENST00000514307 PRAMEF26H0Y7S4 382 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 HDAC3O15379 428 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 CCDC22O60826 627 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 LILRB5O75023 590 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 NCF1P14598 390 aaPredicted RBP15.67■□□□□ 0.1
NUP54-214ENST00000514307 MAGEA9P43362 315 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 CLCQ05315 142 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 SF3A3Q12874 501 aaKnown RBP eCLIP15.67■□□□□ 0.1
NUP54-214ENST00000514307 KIAA0895LQ68EN5 471 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 DOK6Q6PKX4 331 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 EFL1Q7Z2Z2 1120 aaKnown RBP15.67■□□□□ 0.1
NUP54-214ENST00000514307 LSMEM2Q8N112 164 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 CCDC138Q96M89 665 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 LRRC37BQ96QE4 947 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 TUBB6Q9BUF5 446 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 TMEM120AQ9BXJ8 343 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 PCED1AQ9H1Q7 454 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 DNAJC28Q9NX36 388 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 WSB2Q9NYS7 404 aaPredicted RBP15.67■□□□□ 0.1
NUP54-214ENST00000514307 TSR3Q9UJK0 312 aaKnown RBP15.67■□□□□ 0.1
NUP54-214ENST00000514307 IKZF3Q9UKT9 509 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 TRAF6Q9Y4K3 522 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 OR1A2Q9Y585 309 aa15.67■□□□□ 0.1
NUP54-214ENST00000514307 ERICH4A6NGS2 130 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 LATO43561 262 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 NDUFS2O75306 463 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 PSIP1O75475 530 aaKnown RBP15.66■□□□□ 0.1
NUP54-214ENST00000514307 RPN2P04844 631 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 PBLDP30039 288 aaPredicted RBP15.66■□□□□ 0.1
NUP54-214ENST00000514307 HK3P52790 923 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 PKNOX1P55347 436 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 KIAA1024LP59773 190 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 LCP2Q13094 533 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 PPP1R3AQ16821 1122 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 METTL21CQ5VZV1 264 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 C6orf89Q6UWU4 347 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 CCDC121Q6ZUS5 278 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 TRPM8Q7Z2W7 1104 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 CHCHD4Q8N4Q1 142 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 ZNF781Q8N8C0 355 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 FBXO15Q8NCQ5 510 aaPredicted RBP15.66■□□□□ 0.1
NUP54-214ENST00000514307 C10orf82Q8WW14 230 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 TOE1Q96GM8 510 aaKnown RBP15.66■□□□□ 0.1
NUP54-214ENST00000514307 LGR4Q9BXB1 951 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 CD244Q9BZW8 370 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 FOXQ1Q9C009 403 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 CHRDQ9H2X0 955 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 GSTO2Q9H4Y5 243 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 COG4Q9H9E3 785 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 KCNK13Q9HB14 408 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 HEY2Q9UBP5 337 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 ZDHHC2Q9UIJ5 367 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 ADAMTS6Q9UKP5 1117 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 CYP8B1Q9UNU6 501 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 PDE10AQ9Y233 779 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 SLC17A4Q9Y2C5 497 aa15.66■□□□□ 0.1
NUP54-214ENST00000514307 MATN2O00339 956 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 TNFRSF10CO14798 259 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 CRCPO75575 148 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 STK16O75716 305 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 SIX3O95343 332 aaPredicted RBP15.65■□□□□ 0.1
NUP54-214ENST00000514307 GUCA1CO95843 209 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms