RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 OR6P1Q8NGX9 317 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 RSC1A1Q92681 617 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 USP7Q93009 1102 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 PMEPA1Q969W9 287 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 AHCYL2Q96HN2 611 aaKnown RBP9.47□□□□□ -0.89
RNF4-221ENST00000513643 SLC41A2Q96JW4 573 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 C12orf66Q96MD2 445 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 TAAR9Q96RI9 348 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 TCF12Q99081 682 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 DDA1Q9BW61 102 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 DDX47Q9H0S4 455 aaKnown RBP9.47□□□□□ -0.89
RNF4-221ENST00000513643 ZNF768Q9H5H4 540 aaKnown RBP9.47□□□□□ -0.89
RNF4-221ENST00000513643 VPS37BQ9H9H4 285 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 PLAC1Q9HBJ0 212 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 LATS2Q9NRM7 1088 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 CATSPERZQ9NTU4 200 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 FOXJ2Q9P0K8 574 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 PISDQ9UG56 409 aa9.47□□□□□ -0.89
RNF4-221ENST00000513643 GOLGA6L10A0A0M3HER8 536 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 CTAGE9A4FU28 777 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 OR5K3A6NET4 321 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 DNALI1O14645 258 aaPredicted RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 PRMT5O14744 637 aaPredicted RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 RRP8O43159 456 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 KIF1CO43896 1103 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 SLCO2B1O94956 709 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 VAPBO95292 243 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 FTH1P02794 183 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 SLC35G4P0C7Q5 338 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 OR56A5P0C7T3 313 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 JMJD7P0C870 316 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 TYRP1P17643 537 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 CD82P27701 267 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 AOAHP28039 575 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 PBLDP30039 288 aaPredicted RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 CSTF2P33240 577 aaKnown RBP eCLIP9.46□□□□□ -0.9
RNF4-221ENST00000513643 PREPP48147 710 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 TTPAP49638 278 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 PPP1CAP62136 330 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 ETF1P62495 437 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 PRAMEP78395 509 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 GBX1Q14549 363 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 FASTKD1Q53R41 847 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 AARS2Q5JTZ9 985 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 DUS1LQ6P1R4 473 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 CES3Q6UWW8 571 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 SYDE1Q6ZW31 735 aaPredicted RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 CENPUQ71F23 418 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 LDB1Q86U70 411 aaPredicted RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 HOOK3Q86VS8 718 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 LRRC6Q86X45 466 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 PPIL6Q8IXY8 311 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 SLC22A15Q8IZD6 547 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 CARFQ8N187 725 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 ACVR1CQ8NER5 493 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 LKAAEAR1Q8TD35 194 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 HNRNPLLQ8WVV9 542 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 LPGAT1Q92604 370 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.46□□□□□ -0.92e-6■■■■■ 54.9
RNF4-221ENST00000513643 ZDHHC12Q96GR4 267 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 TTC1Q99614 292 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 TRIM56Q9BRZ2 755 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 MENTQ9BUN1 341 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 MVB12BQ9H7P6 319 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 IMP3Q9NV31 184 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 HEBP2Q9Y5Z4 205 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 B3GALT1Q9Y5Z6 326 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 CFAP20Q9Y6A4 193 aaKnown RBP9.46□□□□□ -0.9
RNF4-221ENST00000513643 COLEC10Q9Y6Z7 277 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 ATRXP46100 2492 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 ADAMTS20P59510 1910 aa9.46□□□□□ -0.9
RNF4-221ENST00000513643 IGHV5-51A0A0C4DH38 117 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 CCDC188H7C350 402 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 USP1O94782 785 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 S1PR4O95977 384 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 AMD1P17707 334 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 NELFEP18615 380 aaKnown RBP9.45□□□□□ -0.9
RNF4-221ENST00000513643 OGNP20774 298 aaKnown RBP9.45□□□□□ -0.9
RNF4-221ENST00000513643 PPARGP37231 505 aaPredicted RBP9.45□□□□□ -0.9
RNF4-221ENST00000513643 COL28A1Q2UY09 1125 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 MSS51Q4VC12 460 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 CTSL3PQ5NE16 218 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 NEPROQ6NW34 567 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 C19orf48Q6RUI8 117 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 ZNF572Q7Z3I7 529 aaPredicted RBP9.45□□□□□ -0.9
RNF4-221ENST00000513643 CILP2Q8IUL8 1156 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 RASGRP3Q8IV61 690 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 VRK3Q8IV63 474 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 TBC1D21Q8IYX1 336 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 PHC3Q8NDX5 983 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 FLVCR1-AS1Q8TAF5 88 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 KCNE4Q8WWG9 221 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 TFGQ92734 400 aaPredicted RBP9.45□□□□□ -0.9
RNF4-221ENST00000513643 CRELD1Q96HD1 420 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 RUNDC3BQ96NL0 473 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 CD180Q99467 661 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 NRTNQ99748 197 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 WDR83Q9BRX9 315 aaKnown RBP9.45□□□□□ -0.9
RNF4-221ENST00000513643 ZPBPQ9BS86 351 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 PITPNM3Q9BZ71 974 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms