RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 H3BMH7 237 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 AGPSO00116 658 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 KCNK1O00180 336 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 JRKO75564 520 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 UMODP07911 640 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 SNRPB2P08579 225 aaKnown RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 CD63P08962 238 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 CBSLP0DN79 551 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 NDUFS1P28331 727 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 PBLDP30039 288 aaPredicted RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 PRDX3P30048 256 aaKnown RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 CBSP35520 551 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 TDGF1P3P51864 188 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 FOXL2P58012 376 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 IFI35P80217 286 aaPredicted RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 UBXN1Q04323 297 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 GBE1Q04446 702 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 ZBTB17Q13105 803 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 DPYSL3Q14195 570 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 TLR1Q15399 786 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 LDLRAP1Q5SW96 308 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 ZFYVE27Q5T4F4 411 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 ZNF324BQ6AW86 544 aaPredicted RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 RHBDD2Q6NTF9 364 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 MRPL14Q6P1L8 145 aaKnown RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 TMEM220Q6QAJ8 160 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 CDHR3Q6ZTQ4 885 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 ZNF295-AS1Q8N0V1 137 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 BEND7Q8N7W2 519 aaPredicted RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 BCORP1Q8N888 145 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 OR4E2Q8NGC2 313 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 PROKR1Q8TCW9 393 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 NACC2Q96BF6 587 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 TADA1Q96BN2 335 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 PTERQ96BW5 349 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 IMP4Q96G21 291 aaKnown RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 CCDC120Q96HB5 630 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 SRPK1Q96SB4 655 aaKnown RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 TRIM56Q9BRZ2 755 aaKnown RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 ZNF670Q9BS34 389 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 BPIFA1Q9NP55 256 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 IL26Q9NPH9 171 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 NDOR1Q9UHB4 597 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 LIMA1Q9UHB6 759 aaKnown RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 GPN3Q9UHW5 284 aaPredicted RBP10.6□□□□□ -0.71
DDX41-216ENST00000513562 ACSL5Q9ULC5 683 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 MYO6Q9UM54 1294 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 SPO11Q9Y5K1 396 aa10.6□□□□□ -0.71
DDX41-216ENST00000513562 CCDC168Q8NDH2 2452 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 CCDC66A2RUB6 948 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 GSAPA4D1B5 854 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 DDX3XO00571 662 aaKnown RBP eCLIP10.59□□□□□ -0.71
DDX41-216ENST00000513562 PCDH17O14917 1159 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 GPR39O43194 453 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 MAP3K7O43318 606 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 SLC35G4P0C7Q5 338 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 HMGCLP35914 325 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 KCNK10P57789 538 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 DCDP81605 110 aaKnown RBP10.59□□□□□ -0.71
DDX41-216ENST00000513562 SLC10A2Q12908 348 aaPredicted RBP10.59□□□□□ -0.71
DDX41-216ENST00000513562 SLC14A2Q15849 920 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 C1orf189Q5VU69 101 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 AGAP7PQ5VUJ5 663 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 PRAMEF13Q5VWM6 474 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 ZDHHC20Q5W0Z9 365 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 RPUSD3Q6P087 351 aaKnown RBP10.59□□□□□ -0.71
DDX41-216ENST00000513562 ZNF571Q7Z3V5 609 aaPredicted RBP10.59□□□□□ -0.71
DDX41-216ENST00000513562 MRGPRGQ86SM5 289 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 TMEM151BQ8IW70 566 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 GPR135Q8IZ08 494 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 ZNF808Q8N4W9 903 aaPredicted RBP10.59□□□□□ -0.71
DDX41-216ENST00000513562 CCNYQ8ND76 341 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 ACVR1CQ8NER5 493 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 CNDP1Q96KN2 507 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 RMDN2Q96LZ7 410 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 AGAP4Q96P64 663 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 SRMSQ9H3Y6 488 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 HAUS4Q9H6D7 363 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 CBX8Q9HC52 389 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 SLC6A20Q9NP91 592 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 IFT80Q9P2H3 777 aaPredicted RBP10.59□□□□□ -0.71
DDX41-216ENST00000513562 SUCOQ9UBS9 1254 aaKnown RBP10.59□□□□□ -0.71
DDX41-216ENST00000513562 FBXL4Q9UKA2 621 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 CDYLQ9Y232 598 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 AP1M2Q9Y6Q5 423 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 COLEC10Q9Y6Z7 277 aa10.59□□□□□ -0.71
DDX41-216ENST00000513562 KLHL33A6NCF5 533 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 MGAT4DA6NG13 374 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 BTN3A3O00478 584 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 BTN3A1O00481 513 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 UGT1A9O60656 530 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 OR2B3O76000 313 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 NDST3O95803 873 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 PVRP15151 417 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 UGT1A6P19224 532 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 UGT1A1P22309 533 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 UGT1A4P22310 534 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 SSTR2P30874 369 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 SPAM1P38567 509 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms