RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR2AG2A6NM03 316 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 CFAP99D6REC4 459 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 GAPDHSO14556 408 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-216ENST00000512683 CRTAMO95727 393 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 DDAH2O95865 285 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 SLC35G4P0C7Q5 338 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 CTNNA1P35221 906 aaKnown RBP12.24□□□□□ -0.45
VEGFA-216ENST00000512683 HADHAP40939 763 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 CD151P48509 253 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 CCL11P51671 97 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 GEMP55040 296 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 RRADP55042 308 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 RELNP78509 3460 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 GSE1Q14687 1217 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 PLEKHS1Q5SXH7 462 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 FNBP1LQ5T0N5 605 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 ITPRIPL1Q6GPH6 555 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 RANBP10Q6VN20 620 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 RAD9BQ6WBX8 426 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 FAM83HQ6ZRV2 1179 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-216ENST00000512683 TMEM135Q86UB9 458 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 TMTC1Q8IUR5 882 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 CCDC50Q8IVM0 306 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 SLC25A41Q8N5S1 370 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 GLIS1Q8NBF1 620 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 ACVR1CQ8NER5 493 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 GPR150Q8NGU9 434 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 LRRC45Q96CN5 670 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 DCUN1D1Q96GG9 259 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
VEGFA-216ENST00000512683 C12orf66Q96MD2 445 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 GORASP1Q9BQQ3 440 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 LACRTQ9GZZ8 138 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 WWP1Q9H0M0 922 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 C10orf88Q9H8K7 445 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 AKIRIN1Q9H9L7 192 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-216ENST00000512683 C5AR2Q9P296 337 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 PSMD13Q9UNM6 376 aa12.24□□□□□ -0.45
VEGFA-216ENST00000512683 SPTAN1Q13813 2472 aaKnown RBP12.23□□□□□ -0.45
VEGFA-216ENST00000512683 BTNL10A8MVZ5 291 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 F5H423 210 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-216ENST00000512683 SRP72O76094 671 aaKnown RBP12.23□□□□□ -0.45
VEGFA-216ENST00000512683 PRAMEF1O95521 474 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 PDGFAP04085 211 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 NR1D1P20393 614 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 AKT1P31749 480 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 CHRNA4P43681 627 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 VAV2P52735 878 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 COPS2P61201 443 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 PPP1CAP62136 330 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 RPA4Q13156 261 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 KCNAB1Q14722 419 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 GPR33Q49SQ1 333 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 FAM199XQ6PEV8 388 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-216ENST00000512683 DSELQ8IZU8 1212 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 LRRC57Q8N9N7 239 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 IPMKQ8NFU5 416 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 HM13Q8TCT9 377 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 ADAMTS17Q8TE56 1095 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 CHRNA10Q9GZZ6 450 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 CHST8Q9H2A9 424 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 TFB2MQ9H5Q4 396 aaKnown RBP12.23□□□□□ -0.45
VEGFA-216ENST00000512683 ASB8Q9H765 288 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 MVB12BQ9H7P6 319 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 VPS37BQ9H9H4 285 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 LUC7LQ9NQ29 371 aaKnown RBP12.23□□□□□ -0.45
VEGFA-216ENST00000512683 POMT2Q9UKY4 750 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 TCFL5Q9UL49 500 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 SNX7Q9UNH6 387 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 COL12A1Q99715 3063 aa12.23□□□□□ -0.45
VEGFA-216ENST00000512683 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 IFRD1O00458 451 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-216ENST00000512683 PJA2O43164 708 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 SORBS2O94875 1100 aaKnown RBP12.22□□□□□ -0.45
VEGFA-216ENST00000512683 TMEM63AO94886 807 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 AGFG2O95081 481 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 APOC2P02655 101 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 AGXTP21549 392 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 CDH3P22223 829 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 CTNNA2P26232 953 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 RBL1P28749 1068 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 PRDX3P30048 256 aaKnown RBP12.22□□□□□ -0.45
VEGFA-216ENST00000512683 PTPN7P35236 360 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 RORAP35398 523 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 PREPP48147 710 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 KPNA2P52292 529 aaKnown RBP12.22□□□□□ -0.45
VEGFA-216ENST00000512683 GPS2Q13227 327 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 PRPSAP1Q14558 356 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 CFAP206Q8IYR0 622 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 ACRBPQ8NEB7 543 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 OR4E2Q8NGC2 313 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 ACTL9Q8TC94 416 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 SSC4DQ8WTU2 575 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 LCN9Q8WX39 176 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 ALG3Q92685 438 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 NACC2Q96BF6 587 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 CLIP3Q96DZ5 547 aa12.22□□□□□ -0.45
VEGFA-216ENST00000512683 COPS8Q99627 209 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms