RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 INTS1Q8N201 2190 aaKnown RBP8.85□□□□□ -0.99
NUP54-211ENST00000512151 A0A0J9YYE9 177 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 SLC9B1P1A6NJY1 282 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 AGPSO00116 658 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 CCP110O43303 1012 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 ZNF749O43361 778 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 TRBC1P01850 177 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 PTMAP06454 111 aaKnown RBP8.85□□□□□ -0.99
NUP54-211ENST00000512151 MMEP08473 750 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 FERP16591 822 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 ZNF30P17039 623 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 IGFBP2P18065 325 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 CYP2A7P20853 494 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 RFC1P35251 1148 aaPredicted RBP8.85□□□□□ -0.99
NUP54-211ENST00000512151 PRKCIP41743 596 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 TPI1P60174 286 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 FMO1Q01740 532 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 SLC9A5Q14940 896 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 CEBPEQ15744 281 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 CYP2A13Q16696 494 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 CA9Q16790 459 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 LONRF1Q17RB8 773 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 KHDC1Q4VXA5 237 aaKnown RBP8.85□□□□□ -0.99
NUP54-211ENST00000512151 TMTC4Q5T4D3 741 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 C1orf189Q5VU69 101 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 SMYD5Q6GMV2 418 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 SCYL2Q6P3W7 929 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 WASH2PQ6VEQ5 465 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 B4GALNT4Q76KP1 1039 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 ZNF571Q7Z3V5 609 aaPredicted RBP8.85□□□□□ -0.99
NUP54-211ENST00000512151 TMEM139Q8IV31 216 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 OR2Y1Q8NGV0 311 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 SYN2Q92777 582 aaPredicted RBP8.85□□□□□ -0.99
NUP54-211ENST00000512151 MGME1Q9BQP7 344 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 LIME1Q9H400 295 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 SEC14L3Q9UDX4 400 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 CDYLQ9Y232 598 aa8.85□□□□□ -0.99
NUP54-211ENST00000512151 SOCS6O14544 535 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 SLC19A2O60779 497 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 MTX2O75431 263 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 MTA2O94776 668 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 LSM8O95777 96 aaKnown RBP8.84□□□□□ -0.99
NUP54-211ENST00000512151 SPINT3P49223 89 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 ADAM8P78325 824 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 CDR2Q01850 454 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 RPE65Q16518 533 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 C11orf96Q7Z7L8 435 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 BIVMQ86UB2 503 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 CNGA4Q8IV77 575 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 SLC30A5Q8TAD4 765 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 AGPAT1Q99943 283 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 DPH2Q9BQC3 489 aaPredicted RBP8.84□□□□□ -0.99
NUP54-211ENST00000512151 MESP1Q9BRJ9 268 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 C11orf70Q9BRQ4 267 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 TIMM29Q9BSF4 260 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 FAM83DQ9H4H8 585 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 EPS8L2Q9H6S3 715 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 HRASLS2Q9NWW9 162 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 PLA2G3Q9NZ20 509 aa8.84□□□□□ -0.99
NUP54-211ENST00000512151 CCDC66A2RUB6 948 aa8.83□□□□□ -1
NUP54-211ENST00000512151 OR6C74A6NCV1 312 aa8.83□□□□□ -1
NUP54-211ENST00000512151 GOLGA6L6A8MZA4 724 aa8.83□□□□□ -1
NUP54-211ENST00000512151 DDX3XO00571 662 aaKnown RBP eCLIP8.83□□□□□ -13e-11■■□□□ 12
NUP54-211ENST00000512151 KMOO15229 486 aa8.83□□□□□ -1
NUP54-211ENST00000512151 PRLP01236 227 aa8.83□□□□□ -1
NUP54-211ENST00000512151 SERPING1P05155 500 aa8.83□□□□□ -1
NUP54-211ENST00000512151 CTSBP07858 339 aa8.83□□□□□ -1
NUP54-211ENST00000512151 TPM1P09493 284 aa8.83□□□□□ -1
NUP54-211ENST00000512151 ESRRAP11474 423 aaPredicted RBP8.83□□□□□ -1
NUP54-211ENST00000512151 UNGP13051 313 aaPredicted RBP8.83□□□□□ -1
NUP54-211ENST00000512151 ERCC2P18074 760 aa8.83□□□□□ -1
NUP54-211ENST00000512151 AGXTP21549 392 aa8.83□□□□□ -1
NUP54-211ENST00000512151 GPD1P21695 349 aa8.83□□□□□ -1
NUP54-211ENST00000512151 IDSP22304 550 aa8.83□□□□□ -1
NUP54-211ENST00000512151 MMP8P22894 467 aa8.83□□□□□ -1
NUP54-211ENST00000512151 LMAN1P49257 510 aa8.83□□□□□ -1
NUP54-211ENST00000512151 BPIFB4P59827 614 aa8.83□□□□□ -1
NUP54-211ENST00000512151 ADCY2Q08462 1091 aa8.83□□□□□ -1
NUP54-211ENST00000512151 KLHL30Q0D2K2 578 aa8.83□□□□□ -1
NUP54-211ENST00000512151 PTP4A2Q12974 167 aa8.83□□□□□ -1
NUP54-211ENST00000512151 MFAP5Q13361 173 aa8.83□□□□□ -1
NUP54-211ENST00000512151 GALNT3Q14435 633 aa8.83□□□□□ -1
NUP54-211ENST00000512151 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
NUP54-211ENST00000512151 ASTE1Q2TB18 679 aaPredicted RBP8.83□□□□□ -1
NUP54-211ENST00000512151 MRPL14Q6P1L8 145 aaKnown RBP8.83□□□□□ -1
NUP54-211ENST00000512151 KLHL35Q6PF15 583 aa8.83□□□□□ -1
NUP54-211ENST00000512151 ISLR2Q6UXK2 745 aa8.83□□□□□ -1
NUP54-211ENST00000512151 FAM83HQ6ZRV2 1179 aaPredicted RBP8.83□□□□□ -1
NUP54-211ENST00000512151 LRRTM4Q86VH4 590 aa8.83□□□□□ -1
NUP54-211ENST00000512151 TMEM200AQ86VY9 491 aa8.83□□□□□ -1
NUP54-211ENST00000512151 PTERQ96BW5 349 aa8.83□□□□□ -1
NUP54-211ENST00000512151 EID2BQ96D98 161 aa8.83□□□□□ -1
NUP54-211ENST00000512151 PANX2Q96RD6 677 aa8.83□□□□□ -1
NUP54-211ENST00000512151 KCTD15Q96SI1 283 aaPredicted RBP8.83□□□□□ -1
NUP54-211ENST00000512151 NRTNQ99748 197 aa8.83□□□□□ -1
NUP54-211ENST00000512151 LHPPQ9H008 270 aa8.83□□□□□ -1
NUP54-211ENST00000512151 KLHL25Q9H0H3 589 aa8.83□□□□□ -1
NUP54-211ENST00000512151 FANCEQ9HB96 536 aa8.83□□□□□ -1
NUP54-211ENST00000512151 TRIM39Q9HCM9 518 aa8.83□□□□□ -1
NUP54-211ENST00000512151 NPDC1Q9NQX5 325 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms