RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PNPLA1Q8N8W4 532 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 Q8N9G6 341 aaPredicted RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 EIF1ADQ8N9N8 165 aaKnown RBP8.94□□□□□ -0.98
NUP54-207ENST00000508583 MAGEC3Q8TD91 643 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 PATE1Q8WXA2 126 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 IFT81Q8WYA0 676 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 WWP1Q9H0M0 922 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 P2RY12Q9H244 342 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 OR52A5Q9H2C5 316 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 SLC40A1Q9NP59 571 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 TAS2R13Q9NYV9 303 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 POLG2Q9UHN1 485 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 CRYL1Q9Y2S2 319 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 ASXL3Q9C0F0 2248 aa8.94□□□□□ -0.98
NUP54-207ENST00000508583 UNC13CQ8NB66 2214 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 SPEGQ15772 3267 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 ESYT3A0FGR9 886 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 MED19A0JLT2 244 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 FAM221BA6H8Z2 402 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 OR52A4PA6NMU1 304 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 EIF3FO00303 357 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 MATN2O00339 956 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 NTN3O00634 580 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 PPM1DO15297 605 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 VPS26AO75436 327 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 BANF1O75531 89 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 UBXN7O94888 489 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 SLCO2B1O94956 709 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 EML2O95834 649 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 CBSLP0DN79 551 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 MYF5P13349 255 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 ENO3P13929 434 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 BRAFP15056 766 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 AMD1P17707 334 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 AOAHP28039 575 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 FMO4P31512 558 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 CBSP35520 551 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 MAGEA4P43358 317 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 LEPRP48357 1165 aaKnown RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 HSPA14Q0VDF9 509 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 CTBP1Q13363 440 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 NAB1Q13506 487 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 TRA2AQ13595 282 aaKnown RBP eCLIP8.93□□□□□ -0.98
NUP54-207ENST00000508583 SLMAPQ14BN4 828 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 CLCA4Q14CN2 919 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 HP1BP3Q5SSJ5 553 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 PERM1Q5SV97 790 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 TEDDM1Q5T9Z0 273 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 CDCP2Q5VXM1 449 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 CAPRIN2Q6IMN6 1127 aaKnown RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 ARMC6Q6NXE6 501 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 WDR74Q6RFH5 385 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 ZDHHC24Q6UX98 284 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 UNC5DQ6UXZ4 953 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 C3orf62Q6ZUJ4 267 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 RELL1Q8IUW5 271 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 IGDCC3Q8IVU1 814 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 DENND6AQ8IWF6 608 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 TBC1D21Q8IYX1 336 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 SLC22A15Q8IZD6 547 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 CHCHD4Q8N4Q1 142 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 DCBLD1Q8N8Z6 715 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 PHC3Q8NDX5 983 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 ACVR1CQ8NER5 493 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 OR4D9Q8NGE8 314 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 SKA2Q8WVK7 121 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.93□□□□□ -0.98
NUP54-207ENST00000508583 TFGQ92734 400 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 PWWP2AQ96N64 755 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 BIRC8Q96P09 236 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 TRIM56Q9BRZ2 755 aaKnown RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 RAB11FIP5Q9BXF6 653 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 TRIT1Q9H3H1 467 aaKnown RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 KIR3DX1Q9H7L2 352 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 FBXO6Q9NRD1 293 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 ZDHHC18Q9NUE0 388 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 MOCS1Q9NZB8 636 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 IL1RAPL1Q9NZN1 696 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 ZNF624Q9P2J8 865 aaPredicted RBP8.93□□□□□ -0.98
NUP54-207ENST00000508583 PSMD13Q9UNM6 376 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 ASF1AQ9Y294 204 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 WDR37Q9Y2I8 494 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 PRSS21Q9Y6M0 314 aa8.93□□□□□ -0.98
NUP54-207ENST00000508583 TRBV23OR9-2A0A075B6M9 112 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 IGHV1OR21-1A0A087WYE8 117 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 SLC5A10A0PJK1 596 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 PABPN1LA6NDY0 278 aaKnown RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 HYAL3O43820 417 aaPredicted RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 CSO75390 466 aaKnown RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 GPC4O75487 556 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CD9P21926 228 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 MCM3P25205 808 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CCKBRP32239 447 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CCR7P32248 378 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CCNFP41002 786 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 SLC19A1P41440 591 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CAPZBP47756 277 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 PREPP48147 710 aa8.92□□□□□ -0.98
NUP54-207ENST00000508583 CARSP49589 748 aaKnown RBP8.92□□□□□ -0.98
NUP54-207ENST00000508583 RGS4P49798 205 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms