RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MRPL37Q9BZE1 423 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 EGLN1Q9GZT9 426 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MVB12BQ9H7P6 319 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SYNDIG1Q9H7V2 258 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MINDY3Q9H8M7 445 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 GBA2Q9HCG7 927 aaPredicted RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 KCNK9Q9NPC2 374 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 AGPAT3Q9NRZ7 376 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 PANK4Q9NVE7 773 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 KLHL9Q9P2J3 617 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 KLQ9UEF7 1012 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 CARD8Q9Y2G2 431 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC27A6Q9Y2P4 619 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 MRPS17Q9Y2R5 130 aaKnown RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 AP4B1Q9Y6B7 739 aa4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ARHGEF17Q96PE2 2063 aaPredicted RBP4.24□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF644Q9H582 1327 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ARHGAP42A6NI28 874 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SDR42E2A6NKP2 422 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CGB1A6NKQ9 187 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 NPIPB5A8MRT5 1133 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 TMCO5BA8MYB1 307 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 E9PI62 339 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 HCRTR2O43614 444 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 LANCL1O43813 399 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ERN1O75460 977 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ECI2O75521 394 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CIB2O75838 187 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SMC2O95347 1197 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CH25HO95992 272 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 OTCP00480 354 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 IL1BP01584 269 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 KRT14P02533 472 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CHRM2P08172 466 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CHRM4P08173 479 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 UQCRFS1P1P0C7P4 283 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 EBLN1P0CF75 366 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF853P0CG23 659 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 TROVE2P10155 538 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CLUP10909 449 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PKMP14618 531 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ATP5JP18859 108 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 DRD5P21918 477 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CALB2P22676 271 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC6A2P23975 617 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 DNASE1P24855 282 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CDC25CP30307 473 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PRKAR1BP31321 381 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 TIA1P31483 386 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 S100A5P33763 92 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 GSTM5P46439 218 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 GNAQP50148 359 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PGDP52209 483 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SMSP52788 366 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 LILRA4P59901 499 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SRP54P61011 504 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 GPC5P78333 572 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 HSPA14Q0VDF9 509 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 MTX1Q13505 466 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 DHX34Q14147 1143 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 LARS2Q15031 903 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 AP5B1Q2VPB7 878 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 FBXO43Q4G163 708 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 BCL7AQ4VC05 210 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 RNASEH2BQ5TBB1 312 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 FAM90A2PQ658T7 463 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 TMEM198Q66K66 360 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ATG9BQ674R7 924 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PDPK2PQ6A1A2 396 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CCDC144NLQ6NUI1 221 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PODNL1Q6PEZ8 512 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 C16orf89Q6UX73 402 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF813Q6ZN06 617 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 LRRC70Q7Z2Q7 622 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 KRT27Q7Z3Y8 459 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 RTN4RL2Q86UN3 420 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 COMTD1Q86VU5 262 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ERO1BQ86YB8 467 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CCDC65Q8IXS2 484 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 KCNH5Q8NCM2 988 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 OR10S1Q8NGN2 331 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 NCOA7Q8NI08 942 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ACMSDQ8TDX5 336 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC20A1Q8WUM9 679 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 HEXDCQ8WVB3 486 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 OVCA2Q8WZ82 227 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 STARD8Q92502 1023 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 KCNJ9Q92806 393 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 EFHD2Q96C19 240 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PGM2Q96G03 612 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 BSCL2Q96G97 398 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF668Q96K58 619 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 HAPLN3Q96S86 360 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PLIN2Q99541 437 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 MTG1Q9BT17 334 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SCNM1Q9BWG6 230 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 NOL11Q9H8H0 719 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 METTL7AQ9H8H3 244 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 ANKZF1Q9H8Y5 726 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 KIF9Q9HAQ2 790 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms