RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 LLGL1Q15334 1064 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 ASIC2Q16515 512 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 HADHQ16836 314 aaKnown RBP9.12□□□□□ -0.95
NEDD9-211ENST00000508546 LDLRAP1Q5SW96 308 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 ZDHHC20Q5W0Z9 365 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 HGSNATQ68CP4 663 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 FBXO38Q6PIJ6 1188 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 TTC30BQ8N4P2 665 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-211ENST00000508546 RASGEF1AQ8N9B8 481 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 CCNYQ8ND76 341 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 PPP4R1Q8TF05 950 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 FAF2Q96CS3 445 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 IMP4Q96G21 291 aaKnown RBP9.12□□□□□ -0.95
NEDD9-211ENST00000508546 C12orf66Q96MD2 445 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 INSM2Q96T92 566 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-211ENST00000508546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
NEDD9-211ENST00000508546 OSGIN2Q9Y236 505 aa9.12□□□□□ -0.95
NEDD9-211ENST00000508546 CFAP20Q9Y6A4 193 aaKnown RBP9.12□□□□□ -0.95
NEDD9-211ENST00000508546 ACANP16112 2415 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 A0A1B0GUH1 482 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 SYCE3A1L190 88 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 E7EQ34 232 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 AURKAO14965 403 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 MAP3K7O43318 606 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ZNF749O43361 778 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 LDB2O43679 373 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 NDST3O95803 873 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 POLR2CP19387 275 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 NDUFS1P28331 727 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 PTGER4P35408 488 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 TSFMP43897 325 aaKnown RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 PREPP48147 710 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ARCN1P48444 511 aaKnown RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 KLHL30Q0D2K2 578 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ZBTB17Q13105 803 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ART3Q13508 389 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ANO6Q4KMQ2 910 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ZFYVE27Q5T4F4 411 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 E4F1Q66K89 784 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 CCDC70Q6NSX1 233 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 DUS1LQ6P1R4 473 aaKnown RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 TMEM220Q6QAJ8 160 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 IGFL2Q6UWQ7 119 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 B4GALNT4Q76KP1 1039 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 NT5DC3Q86UY8 548 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 MAP7D3Q8IWC1 876 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 PQLC3Q8N755 202 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 DDHD1Q8NEL9 900 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 GRHL3Q8TE85 626 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 FAR1Q8WVX9 515 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 BTBD6Q96KE9 485 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 AGAP3Q96P47 875 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 WDR77Q9BQA1 342 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 PITPNM3Q9BZ71 974 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 TRIM8Q9BZR9 551 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 SLC7A5P2Q9GIP4 190 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 WWP1Q9H0M0 922 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 SLC25A51Q9H1U9 297 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 TRABDQ9H4I3 376 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 CBX8Q9HC52 389 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ZBTB20Q9HC78 741 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 BPIFA1Q9NP55 256 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 IL26Q9NPH9 171 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ATP13A2Q9NQ11 1180 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 P4HTMQ9NXG6 502 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ANAPC7Q9UJX3 599 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 ACSL5Q9ULC5 683 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 NOVA2Q9UNW9 492 aaKnown RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 KLF2Q9Y5W3 355 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-211ENST00000508546 COLEC10Q9Y6Z7 277 aa9.11□□□□□ -0.95
NEDD9-211ENST00000508546 NCOA6Q14686 2063 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 A0A1W2PQJ5 194 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 MGAT4DA6NG13 374 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 OR2AG2A6NM03 316 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 MYO1FO00160 1098 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 DDX3YO15523 660 aaKnown RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 NADKO95544 446 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 PYGMP11217 842 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 DRD2P14416 443 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 ST6GAL1P15907 406 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 HLA-DPA1P20036 260 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 PRDX3P30048 256 aaKnown RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 FOLR3P41439 243 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 MYL5Q02045 173 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 AIMP2Q13155 320 aaKnown RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 ITGA9Q13797 1035 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 PCSK7Q16549 785 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 ATP13A4Q4VNC1 1196 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 B3GNTL1Q67FW5 361 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 KCTD6Q8NC69 237 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 ACVR1CQ8NER5 493 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-211ENST00000508546 OR4E2Q8NGC2 313 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 OR2Y1Q8NGV0 311 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 OR2L2Q8NH16 312 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 NACC2Q96BF6 587 aa9.1□□□□□ -0.95
NEDD9-211ENST00000508546 PTERQ96BW5 349 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms