RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 GRHL1Q9NZI5 618 aa19.42■□□□□ 0.7
SNX25-204ENST00000506896 COLEC10Q9Y6Z7 277 aa19.42■□□□□ 0.7
SNX25-204ENST00000506896 NBEAQ8NFP9 2946 aa19.42■□□□□ 0.7
SNX25-204ENST00000506896 A0A1W2PNU3 283 aaPredicted RBP19.41■□□□□ 0.7
SNX25-204ENST00000506896 UBA6A0AVT1 1052 aaPredicted RBP19.41■□□□□ 0.7
SNX25-204ENST00000506896 EIF3HO15372 352 aaKnown RBP eCLIP19.41■□□□□ 0.7
SNX25-204ENST00000506896 TLX3O43711 291 aaPredicted RBP19.41■□□□□ 0.7
SNX25-204ENST00000506896 BRINP1O60477 761 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 BANF1O75531 89 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 NDUFS1P28331 727 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 CCKBRP32239 447 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 LSSP48449 732 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 PDX1P52945 283 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 PDIA2Q13087 525 aaKnown RBP19.41■□□□□ 0.7
SNX25-204ENST00000506896 SYTL3Q4VX76 610 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 KCNMB4Q86W47 210 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 ZNF761Q86XN6 746 aaPredicted RBP19.41■□□□□ 0.7
SNX25-204ENST00000506896 IGDCC3Q8IVU1 814 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 CEP112Q8N8E3 955 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 ASZ1Q8WWH4 475 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 TMEM159Q96B96 161 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 PWWP2AQ96N64 755 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 LRRC1Q9BTT6 524 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 PHACTR1Q9C0D0 580 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 STRADBQ9C0K7 418 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 IL1RAPL1Q9NZN1 696 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 CHMP2BQ9UQN3 213 aa19.41■□□□□ 0.7
SNX25-204ENST00000506896 A0A087WV48 116 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 SLC5A10A0PJK1 596 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 DXOO77932 396 aaKnown RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 APOA4P06727 396 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 PPM1FP49593 454 aaPredicted RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 INHBCP55103 352 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 EIF3BP55884 814 aaKnown RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 BOP1Q14137 746 aaKnown RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 GPR18Q14330 331 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 FRG1Q14331 258 aaKnown RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 TMED2Q15363 201 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 GLE1Q53GS7 698 aaKnown RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 HSP90AA5PQ58FG0 334 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 WDR74Q6RFH5 385 aaPredicted RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 UNC5AQ6ZN44 842 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 PDZD3Q86UT5 571 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 SPDYE1Q8NFV5 336 aaPredicted RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 ART4Q93070 314 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 ATXN7L3BQ96GX2 97 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 RMDN2Q96LZ7 410 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 BIRC8Q96P09 236 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 POLR1BQ9H9Y6 1135 aa19.4■□□□□ 0.7
SNX25-204ENST00000506896 ATXN7L1Q9ULK2 861 aaPredicted RBP19.4■□□□□ 0.7
SNX25-204ENST00000506896 FAM208BQ5VWN6 2430 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 UBXN7O94888 489 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 S1PR4O95977 384 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 MPOP05164 745 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 CCR7P32248 378 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 SLC1A2P43004 574 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 PREPP48147 710 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 PLTPP55058 493 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 ZFP36L1Q07352 338 aaKnown RBP19.39■□□□□ 0.69
SNX25-204ENST00000506896 EIF3IQ13347 325 aaKnown RBP19.39■□□□□ 0.69
SNX25-204ENST00000506896 CTBP1Q13363 440 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 KRT33BQ14525 404 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 STEAP4Q687X5 459 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 TMEM71Q6P5X7 295 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 IGF2-ASQ6U949 168 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 USP53Q70EK8 1073 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 SLITRK4Q8IW52 837 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 CNTN4Q8IWV2 1026 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 OR4D9Q8NGE8 314 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 SNIP1Q8TAD8 396 aaKnown RBP19.39■□□□□ 0.69
SNX25-204ENST00000506896 SEC14L1Q92503 715 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 FGF11Q92914 225 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 CERS2Q96G23 380 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 CFAP36Q96G28 342 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 LIN37Q96GY3 246 aaPredicted RBP19.39■□□□□ 0.69
SNX25-204ENST00000506896 PRR11Q96HE9 360 aaPredicted RBP19.39■□□□□ 0.69
SNX25-204ENST00000506896 TBC1D10AQ9BXI6 508 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 FOXP3Q9BZS1 431 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 ZMYND15Q9H091 742 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 MVB12BQ9H7P6 319 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 RDH14Q9HBH5 336 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 FBXO5Q9UKT4 447 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 CRYL1Q9Y2S2 319 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 CFAP20Q9Y6A4 193 aaKnown RBP19.39■□□□□ 0.69
SNX25-204ENST00000506896 COMMD10Q9Y6G5 202 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 ZFYVE26Q68DK2 2539 aa19.39■□□□□ 0.69
SNX25-204ENST00000506896 IQCF5A8MTL0 148 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 ITGB6P18564 788 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 AOAHP28039 575 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 PDHA2P29803 388 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 FMO4P31512 558 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 EIF2S3P41091 472 aaKnown RBP19.38■□□□□ 0.69
SNX25-204ENST00000506896 GABREP78334 506 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 TRA2AQ13595 282 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNX25-204ENST00000506896 TBC1D25Q3MII6 688 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 CTSL3PQ5NE16 218 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 HP1BP3Q5SSJ5 553 aaPredicted RBP19.38■□□□□ 0.69
SNX25-204ENST00000506896 NKAIN2Q5VXU1 208 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 KLHL35Q6PF15 583 aa19.38■□□□□ 0.69
SNX25-204ENST00000506896 KIAA0408Q6ZU52 694 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms