RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.18□□□□□ -0.62
KDM3B-203ENST00000505756 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
KDM3B-203ENST00000505756 PKNOX2Q96KN3 472 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 CCDC74BQ96LY2 380 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 TTC1Q99614 292 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 TBC1D10AQ9BXI6 508 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 IL22Q9GZX6 179 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 EPB41L4BQ9H329 900 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 VIPAS39Q9H9C1 493 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 PDP2Q9P2J9 529 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 ACSL5Q9ULC5 683 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 PCDHGA7Q9Y5G6 932 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 OR51F1A6NGY5 319 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 QSOX1O00391 747 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 MAP2K7O14733 419 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 KRT37O76014 449 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 AP2A2O94973 939 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 GOT2P00505 430 aaKnown RBP11.17□□□□□ -0.62
KDM3B-203ENST00000505756 GSTM1P09488 218 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 SLC35G4P0C7Q5 338 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 HGFP14210 728 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 NSG1P42857 185 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 MAPK9P45984 424 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 SESN2P58004 480 aaPredicted RBP11.17□□□□□ -0.62
KDM3B-203ENST00000505756 PRAMEP78395 509 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 GSTM4Q03013 218 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 DHX9Q08211 1270 aaKnown RBP11.17□□□□□ -0.62
KDM3B-203ENST00000505756 GPR18Q14330 331 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 RPE65Q16518 533 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 DBN1Q16643 649 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 PACS1Q6VY07 963 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 CERS6Q6ZMG9 384 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 CFAP206Q8IYR0 622 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 RCBTB1Q8NDN9 531 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 OR4L1Q8NH43 312 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 NCSTNQ92542 709 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 SGSM3Q96HU1 749 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 ZNF778Q96MU6 729 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 WDR83Q9BRX9 315 aaKnown RBP11.17□□□□□ -0.62
KDM3B-203ENST00000505756 CCM2Q9BSQ5 444 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 WWP1Q9H0M0 922 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 CHRAC1Q9NRG0 131 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 BFARQ9NZS9 450 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 TMEM9Q9P0T7 183 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 PISDQ9UG56 409 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 SLC2A6Q9UGQ3 507 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 PSMD13Q9UNM6 376 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 TEX264Q9Y6I9 313 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 ZFHX4Q86UP3 3567 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 CELSR3Q9NYQ7 3312 aa11.17□□□□□ -0.62
KDM3B-203ENST00000505756 MN1Q10571 1320 aaPredicted RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 NVLO15381 856 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 SPAG6O75602 509 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 UBXN7O94888 489 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 NUDT17P0C025 328 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 MTHFD1P11586 935 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 AMD1P17707 334 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 ITIH1P19827 911 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 MPSTP25325 297 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 CSTF2P33240 577 aaKnown RBP eCLIP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 ABCG1P45844 678 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 FRG1Q14331 258 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 UAP1Q16222 522 aaPredicted RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 DNAJC21Q5F1R6 531 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 AARS2Q5JTZ9 985 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 XKR5Q6UX68 686 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 MICALCLQ6ZW33 695 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 PLXDC1Q8IUK5 500 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 CLDN19Q8N6F1 224 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 AGBL5Q8NDL9 886 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 GPR150Q8NGU9 434 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 OR6P1Q8NGX9 317 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 ZFPM2Q8WW38 1151 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 SIGLEC10Q96LC7 697 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 DPH1Q9BZG8 443 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 B3GNT4Q9C0J1 378 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 CDC42EP4Q9H3Q1 356 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 COG4Q9H9E3 785 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 MRM3Q9HC36 420 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 TREX1Q9NSU2 369 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 IMP3Q9NV31 184 aaKnown RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 ZNF446Q9NWS9 450 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 OGFRQ9NZT2 677 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 FAM8A1Q9UBU6 413 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 ACSL6Q9UKU0 697 aa11.16□□□□□ -0.62
KDM3B-203ENST00000505756 ANKRD11Q6UB99 2663 aaPredicted RBP11.16□□□□□ -0.62
KDM3B-203ENST00000505756 APC2O95996 2303 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 PRAMEF33A0A0G2JMD5 474 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 F8W8V4 182 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 AGRPO00253 132 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 TTC4O95801 387 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 C9P02748 559 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 FTH1P02794 183 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 POLBP06746 335 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 GSTA2P09210 222 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 OR56A5P0C7T3 313 aa11.15□□□□□ -0.62
KDM3B-203ENST00000505756 TYRP1P17643 537 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms