RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 PRPF31Q8WWY3 499 aaKnown RBP3.12□□□□□ -1.91
RFC1-209ENST00000504974 OXNAD1Q96HP4 312 aaPredicted RBP3.12□□□□□ -1.91
RFC1-209ENST00000504974 IL17FQ96PD4 163 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 GCNAQ96QF7 691 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 MEIS3Q99687 375 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 KRTAP1-5Q9BYS1 174 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 UBTD1Q9HAC8 227 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.12□□□□□ -1.91
RFC1-209ENST00000504974 SELENONQ9NZV5 590 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 DNAJB4Q9UDY4 337 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 POU2F3Q9UKI9 436 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 RALYQ9UKM9 306 aaKnown RBP3.12□□□□□ -1.91
RFC1-209ENST00000504974 EXO1Q9UQ84 846 aaKnown RBP3.12□□□□□ -1.91
RFC1-209ENST00000504974 FMN2Q9NZ56 1722 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 SLIT2O94813 1529 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 ABCC11Q96J66 1382 aa3.12□□□□□ -1.91
RFC1-209ENST00000504974 DISP2A7MBM2 1401 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 TTC3P53804 2025 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 IGHV4OR15-8A0A075B7B6 117 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 LNP1A1A4G5 178 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 DENND3A2RUS2 1198 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 C4orf47A7E2U8 309 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 ZNF587BE7ETH6 402 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 ADAMDEC1O15204 470 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 EIF3DO15371 548 aaKnown RBP eCLIP3.11□□□□□ -1.91
RFC1-209ENST00000504974 PAPSS1O43252 624 aaPredicted RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 ZNHIT1O43257 154 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 ADAM20O43506 726 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 BMP10O95393 424 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 PPP1R3DO95685 299 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 CENPBP07199 599 aaPredicted RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 FGF3P11487 239 aaPredicted RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 HLA-DOBP13765 273 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 CCKBRP32239 447 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 RGS19P49795 217 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 HSD17B4P51659 736 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 SNRPEP62304 92 aaKnown RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 COASYQ13057 564 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 PLA2G7Q13093 441 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 GTF2H2Q13888 395 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 ZNF234Q14588 700 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 MVPQ14764 893 aaKnown RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 STXBP5Q5T5C0 1151 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 CAPRIN2Q6IMN6 1127 aaKnown RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 LCN10Q6JVE6 187 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 TRNP1Q6NT89 227 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 GTF2H2CQ6P1K8 395 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 FAM171BQ6P995 826 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 TPRG1Q6ZUI0 275 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 HAUS6Q7Z4H7 955 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 GALNT5Q7Z7M9 940 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 KMT5CQ86Y97 462 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 MCEMP1Q8IX19 187 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.11□□□□□ -1.91
RFC1-209ENST00000504974 GBGT1Q8N5D6 347 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 C1orf52Q8N6N3 182 aaKnown RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 AVL9Q8NBF6 648 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 OR52I2Q8NH67 350 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 TBC1D16Q8TBP0 767 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 TMEM255BQ8WV15 326 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 PHF21AQ96BD5 680 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 PTERQ96BW5 349 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 DUX5Q96PT3 197 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 GFI1Q99684 422 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 CD93Q9NPY3 652 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 TMEM30AQ9NV96 361 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 PSD3Q9NYI0 1048 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 TAB2Q9NYJ8 693 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 WSB2Q9NYS7 404 aaPredicted RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 CLIC5Q9NZA1 410 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 MARCH4Q9P2E8 410 aaPredicted RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 KLHL9Q9P2J3 617 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 ZNF148Q9UQR1 794 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 FAM169AQ9Y6X4 670 aa3.11□□□□□ -1.91
RFC1-209ENST00000504974 DHX57Q6P158 1386 aaKnown RBP3.11□□□□□ -1.91
RFC1-209ENST00000504974 ITSN1Q15811 1721 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 TULP4Q9NRJ4 1543 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 LOC100509620A0A075B734 347 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 hCG_1809904A0A1W2PP81 198 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 A0A1W2PPE2 198 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 A0A1W2PR64 198 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 SYNDIG1LA6NDD5 238 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 OR5K3A6NET4 321 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 LILRA5A6NI73 299 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 GLOD5A6NK44 160 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 H0YIN7 160 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 SH2B2O14492 632 aaPredicted RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 ACOT8O14734 319 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 NDUFS4O43181 175 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 WDR1O75083 606 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 ABCB1P08183 1280 aaPredicted RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 FAM106CPP0CH98 169 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 PRLRP16471 622 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 TRIM21P19474 475 aaKnown RBP3.1□□□□□ -1.91
RFC1-209ENST00000504974 DNASE1P24855 282 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 PSMC4P43686 418 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 LIG4P49917 911 aa3.1□□□□□ -1.91
RFC1-209ENST00000504974 ARSEP51690 589 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms